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Name : gabD (BAV2549) Accession : YP_787057.1 Strain : Bordetella avium 197N Genome accession: NC_010645 Putative virulence/resistance : Unknown Product : succinate-semialdehyde dehydrogenase (NADP+) Function : - COG functional category : C : Energy production and conversion COG ID : COG1012 EC number : 1.2.1.16 Position : 2757391 - 2758848 bp Length : 1458 bp Strand : + Note : - DNA sequence : TTGACCCAGTCCCTGAGCCGCCCCGACCTGCTGCGCGACGCCTGCTTCGTCGACGGCAAATGGGTGCCGGCCACCGGCGC GAGCATCCCGGTAGACAATCCCTCCAGCGGCAAAACCATTGTTGCGGTACCCAAACTGGGCCGCAAGGAAGCCGAAGCCG CCATCGCCAGCGCCGAAAAAGCGCTGCCGGCCTGGTCTGCCAAGACCGGCAAGGAACGCGCCGCCATTTTGCTGAAATGG GCCAACCTGATGATGCAGCATCAACAGGATCTGGCCATCATCATGACCTCAGAGCAGGGCAAACCTTTGCCCGAGGCCGC CGGCGAAATCGCCTACGCCGCCTCCTTTCTGGAGTGGTTCGGCGAAGAAGCCAAGCGCATCGATGGCGATGTGCTGCAAA GCCCCAAGGCCGGCCAACGCATTCTGGTGCTGAAGCAGCCGATCGGCGTGACCGCCGCCATTACGCCGTGGAACTTCCCG GCCGCCATGATCACCCGCAAGGTGGGTCCGGCGCTGGCCGCAGGTTGCACGATGGTGGTCAAGCCCGCCCAGCAAACGCC GCTGACCGCACTGGCCCTGGCCGTGCTGGCCGAAGAAGCGGGTGTGCCGGCGGGTGTGTTCCATGTGATCACCGGCAGCT CGCGTGAAATCGGCGCCGCGCTGTGCGAAAGCGATGTCGTGCGCAAGCTGAGTTTCACGGGTTCGACCGAAGTGGGCCGC ACCCTGATGGAGCAATGCGCCCCGACCATCAAAAAGCTGTCGCTCGAATTGGGCGGCAACGCACCCTTCATCGTGTTCGA CGACGCCGATCTCGATCGCGCCGTAGACGGCATTCTGGCCTCGAAGTATCGCAATGCCGGCCAGACCTGCGTATGCGCCA ACCGCATCTATGTGCAGGCCGGTGTTTACGAAGAAGTCGCCAAGCGGCTGACCGCCAAGGTTGAAGCCATGAAGGTAGGC GACGGTTTCGAGAAAGGCGTGACCCAGGGTCCGCTGATCGACGACGCCGCCGTGGCCAAGGTCAAGGAACACATCGCCGA TGCCGTCAGCAAAGGCGCCAAAATAGCCGCCGGCGGCAAGACCCATGCGCTGGGCGGCAATTTCTTCGAACCGACCATCG TGCGCGATGTGACGCAAGACATGCTGTTCGCCTCCGAAGAAACCTTCGGCCCGGTCGCGCCGCTGTTCAAGTTTGAAACC GAAGCGGAAGTGCTGCAGTACGCCAATGACACGATTTTCGGTCTGGCGGCCTACTTCTTCACGCGCGACTACGCCCGCGT CTGGCGCGTGTCCGAAGCGCTGGAATATGGCATCGTCGGCATCAACACCGGCCTGGTCTCCAATGAGGTCGGTCCCTTCG GCGGCGTCAAGCAATCCGGTCTGGGCCGTGAAGGTTCCAAATACGGCATCGAAGACTATCTCGAACTGAAGTACCTCTGC GTAGACCTGGGCGCCTAA Protein sequence : MTQSLSRPDLLRDACFVDGKWVPATGASIPVDNPSSGKTIVAVPKLGRKEAEAAIASAEKALPAWSAKTGKERAAILLKW ANLMMQHQQDLAIIMTSEQGKPLPEAAGEIAYAASFLEWFGEEAKRIDGDVLQSPKAGQRILVLKQPIGVTAAITPWNFP AAMITRKVGPALAAGCTMVVKPAQQTPLTALALAVLAEEAGVPAGVFHVITGSSREIGAALCESDVVRKLSFTGSTEVGR TLMEQCAPTIKKLSLELGGNAPFIVFDDADLDRAVDGILASKYRNAGQTCVCANRIYVQAGVYEEVAKRLTAKVEAMKVG DGFEKGVTQGPLIDDAAVAKVKEHIADAVSKGAKIAAGGKTHALGGNFFEPTIVRDVTQDMLFASEETFGPVAPLFKFET EAEVLQYANDTIFGLAAYFFTRDYARVWRVSEALEYGIVGINTGLVSNEVGPFGGVKQSGLGREGSKYGIEDYLELKYLC VDLGA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| orf17 | AAO17183.1 | Orf17 | Not tested | tcd island | Protein | 1e-136 | 63 |
| cur_1509 | YP_001800903.1 | NAD-dependent aldehyde dehydrogenase | Not tested | Not named | Protein | 1e-72 | 41 |
