Gene Information

Name : hemC (BAV2300)
Accession : YP_786814.1
Strain : Bordetella avium 197N
Genome accession: NC_010645
Putative virulence/resistance : Unknown
Product : porphobilinogen deaminase
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0181
EC number : 2.5.1.61
Position : 2480886 - 2481830 bp
Length : 945 bp
Strand : -
Note : transformation of porphobilinogen to hydroxymethylbilane in porphyrin biosynthesis

DNA sequence :
GTGACCCTGCCCCAACGCCTGGTAATTGCTACCCGCGCCAGCCGGCTTGCCCTATGGCAAGCCGAGCATGTGCGTGACAG
ACTGCGTGACTTGTATCCGGCCTGTGCCGTCGAGCTTCTTACCCTGACCACCCGGGGCGATCAGATTCTTGATCGCTCGC
TCTCCAAAGTGGGGGGTAAGGGCTTGTTCGTCAAAGAGCTCGAGCATGCTTTGCTTGACGGCCGCGCCGATCTGGCCGTG
CATTCTCTGAAGGATGTGCCGGTCGATATACAAGCGCCTTTCGCCCTGAGCACCGTGCTCGAGCGTGCCGATCCGCGCGA
TGCCTTTGTTTCAGCGCGCTATGCTTCGCTCGACGCTTTGCCTGTCGGGGCTGTCGTGGGAACCTCCAGCCTGCGCCGAG
AGGCGCAGATCCGAGCGGCTCGTCCGGATCTGGTCGTCAGGCCTTTGCGTGGCAATCTTGATACCCGGCTGGGCAAGCTG
GATCGCGGCGAATACGATGCCGTCGTTTTGGCGGCAGCGGGCCTGGAGCGCATCGGTTATGGCGATCGTATTCGCGCACG
TCTGGCGCCTGCTCAAAGTTTGCCTGCCGCCGGACAGGGCGCGCTGGGTATCGAAATCCGCGATGACCGTGACGACATGC
GAGCGTGGCTGGCCCCTCTGTCCGATGCCAGCACTACCGCCTGCGTCAGCGCCGAGCGTGCGGTCTCGCGCGCCTTGGGC
GGCTCCTGCCAGGTGCCTATCGGCGCTTATGCCGAGTTGCATGGGCAGACCCTGCGTATCGATGCCCTGGTTGCCTCTCC
CGATGGCCGCCGCATCCTGAGGGCTTCGCGGCTAGGGCCTGTGGCCGAGGCCGATTCTCTGGGTATGGCGGTAGCCCATG
ATTTGTTGGCTCAGGGCGGCGACGCCATTCTTGCCGAGCTGCTACAGGACGACGCAGCGTCTTGA

Protein sequence :
VTLPQRLVIATRASRLALWQAEHVRDRLRDLYPACAVELLTLTTRGDQILDRSLSKVGGKGLFVKELEHALLDGRADLAV
HSLKDVPVDIQAPFALSTVLERADPRDAFVSARYASLDALPVGAVVGTSSLRREAQIRAARPDLVVRPLRGNLDTRLGKL
DRGEYDAVVLAAAGLERIGYGDRIRARLAPAQSLPAAGQGALGIEIRDDRDDMRAWLAPLSDASTTACVSAERAVSRALG
GSCQVPIGAYAELHGQTLRIDALVASPDGRRILRASRLGPVAEADSLGMAVAHDLLAQGGDAILAELLQDDAAS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB0868_00331 YP_008211657.1 Porphobilinogen deaminase Not tested AbaR26 Protein 6e-73 54
BJAB07104_00327 YP_008207792.1 Porphobilinogen deaminase Not tested AbaR25 Protein 6e-73 54