Gene Information

Name : dnaB (BAV2170)
Accession : YP_786684.1
Strain : Bordetella avium 197N
Genome accession: NC_010645
Putative virulence/resistance : Unknown
Product : replicative DNA helicase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG0305
EC number : 3.6.1.-
Position : 2332435 - 2333808 bp
Length : 1374 bp
Strand : -
Note : unwinds double stranded DNA

DNA sequence :
ATGAATACTCCTGCCGACTCCCAGCTCGAATACCTGCGCGTACCGCCGCATTCCATCGAGGCCGAGCAATCTGTGCTAGG
CGGCCTGCTGCTGGATAATGCCGCCTGGGACCGCATTGCCGACGTGCTGGGCGAAGAGGACTTCTATCGCCATGACCACC
GTATTATCTGGCAGCATATCGCCCGCCTGATTGGTTTGGCGCGTCCGGCGGACGTGATCACGGTCAACGAGTCTTTGGTC
AGCGCTGGCAAGTCCGAAGAAGTGGGGGGGCTGGCCTATCTGAATGCGCTGGCGCACAACACACCGTCAGCGGCGAATAT
CCGGCGTTACGCTGAAATCGTGGCCGAGCGCGCCACCCTGCGCAAGCTGGTGACGATCGCTGACGAAATTTCGGCCGCTG
CCCTGAACCCGCAGGGCAAGGAAGCGCGACAGCTGCTCGACGAGGCGGAGTCCAAAGTATTCAAGATCGCCCAGGAAGGC
GCCCGCGGGTCGGGGGGCTTTCAGGAGATTCAGCCGCTGCTCACCCAGGTGGTCGAACGCATCGACGAGCTTTATCACCG
CGAATCGGAATCCGATGTGACGGGGGTGCCCACGGGTTTCACCGACCTCGACAAGATGACCTCCGGGCTGCAGCCGGGCG
ATCTGGTCATCGTGGCCGGCCGGCCCTCGATGGGTAAAACCTCGTTCTCGATGAACATCGGTGAGCATGTGGCCATCGAG
CAGGGCCTGCCTGTGGCGGTGTTCTCGATGGAAATGGGCGCGGTGCAGCTTGCCATGCGTATGTTGGGTTCGGTGGGGAT
GTTGGATCAGCATCGCATGCGCACGGGCAAACTGATTGCCGAGGACTGGCCGCGTGTGACGCATGCCGTGCAGCTCATGC
AGGAGGCTCAGGTCTATATTGACGAGACCCCGGCGTTGTCTGCGATGGAGGTCCGCGCCCGGGCTCGGCGCTTGGCGCGG
CAGTGCGGGCAGCTTGGCCTGATCATCATCGACTATATTCAGTTGATGTCGGCCAGTTCGGCGGGCGAGAACCGCGCCAC
CGAAGTGTCGGAAATCAGCCGTTCGCTCAAGGGGCTCGCCAAAGAGTTGAATTGCCCGCTGATTGCCTTGTCTCAGCTCA
ACCGCAGTCTGGAGCAGCGTCCCAACAAGCGTCCTGTGATGAGCGATTTGCGCGAGTCGGGCGCTATCGAACAGGACGCC
GACGTCATTCTCTTCATCTATCGCGACGAAGTCTACAACCCCGATTCCCCTGACAAGGGTACGGCCGAGATCATTATCGG
TAAGCAGCGTAACGGCCCTATCGGTACGGTGCGCCTGACTTTCCAGGGCATGAGCACGCGTTTTCTCAACTTCACGTCCG
CGCCGCAGTACTGA

Protein sequence :
MNTPADSQLEYLRVPPHSIEAEQSVLGGLLLDNAAWDRIADVLGEEDFYRHDHRIIWQHIARLIGLARPADVITVNESLV
SAGKSEEVGGLAYLNALAHNTPSAANIRRYAEIVAERATLRKLVTIADEISAAALNPQGKEARQLLDEAESKVFKIAQEG
ARGSGGFQEIQPLLTQVVERIDELYHRESESDVTGVPTGFTDLDKMTSGLQPGDLVIVAGRPSMGKTSFSMNIGEHVAIE
QGLPVAVFSMEMGAVQLAMRMLGSVGMLDQHRMRTGKLIAEDWPRVTHAVQLMQEAQVYIDETPALSAMEVRARARRLAR
QCGQLGLIIIDYIQLMSASSAGENRATEVSEISRSLKGLAKELNCPLIALSQLNRSLEQRPNKRPVMSDLRESGAIEQDA
DVILFIYRDEVYNPDSPDKGTAEIIIGKQRNGPIGTVRLTFQGMSTRFLNFTSAPQY

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed ABR13456.1 replicative DNA helicase Not tested PAGI-5 Protein 2e-102 52
dnaB2 YP_001402701.1 replicative DNA helicase Not tested YAPI Protein 6e-92 49
api2 CAF28476.1 putative DNA binding protein with DNA-dependent ATPase activity Not tested YAPI Protein 1e-91 48
dnaB CAI36044.1 replicative DNA helicase DnaB Not tested PPHGI-1 Protein 3e-87 47
PMI2640 YP_002152342.1 DNA helicase Not tested Not named Protein 1e-89 47
dnaB2 YP_001007676.1 putative DNA helicase Not tested YAPI Protein 1e-89 46
STY4522 NP_458617.1 DNA helicase Not tested SPI-7 Protein 9e-82 45
t4227 NP_807829.1 DNA helicase Not tested SPI-7 Protein 9e-82 45
dnaB1 YP_005176258.1 replicative DNA helicase Not tested ICEPmu1 Protein 7e-74 43