Gene Information

Name : glcE (BAV2150)
Accession : YP_786666.1
Strain : Bordetella avium 197N
Genome accession: NC_010645
Putative virulence/resistance : Unknown
Product : glycolate oxidase FAD binding subunit
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG0277
EC number : -
Position : 2299822 - 2300925 bp
Length : 1104 bp
Strand : -
Note : -

DNA sequence :
ATGAAGTTTGTGCTGGCGGAGTTGTGCGATCAGGTCTTGACGGCGCATGCGGCCCATAAGTCGGTGTTCATCGCCGGGGG
CGGCAGCAAACACTTTTATGGCAATACGTCTGCGTTGCGCGAAAGTCATTTCGTACTCGACATGACGGCCTATCGCGGCA
TCGTGAGCTATTACCCATCGGAGCTCGTGGTGACTGTGCGAGCGGGGACGCCGCTCGCCGAGCTGGAGTCTATCTTGGCC
GATCGGGGCCAGATGCTGGCGTTTGAGCCTCCGCATTTTAATGATCGCGCAACGGTGGGCGGCTGTGTCGCGGCAGGGCT
GGCTGGTCCGCGCCGCGTCGCCAGCGGCGGCGTGCGGGATTATGTGCTGGGCGCCCGTTTGCTTGATTCGCAGGGCCGCT
GGCTCTCGTTCGGCGGAGAGGTCATGAAGAACGTGGCGGGTTATGACGTTTCGCGCCTGTTGAGCGGCTCGCTCGGTATT
TTTGGTGCCATCGTGGAGGTTTCGCTCAAGGTCGTGCCCCTGCCGGCAGCCGAGTTGACCTTGCAGGGGCAGGCTTCGCA
GGCAGAGGCCTTGCAGTGCTTCGCGAGATGGCGTGCGCTGCCGCTGCCTATAACGGCCAGTGCATGGGTTCCCGACACCG
AGGCAGGAGAGGGGGGGCGATGGCTGGCGCGCCTATCAGGCGCACCCGTCGCGCTCCAGGCGGCGCGAGGGCGCATGGGG
GGCGAAGTGCTGGAAAGCGTCGAGGCCAGGACGTTCTGGCGTTCTCTGCGCGAGCAAACGCACGTCTTTTTTCAGGCAGG
CACGCCACTCTGGAGGCTTGCGGTGGCTCCTGTCTCGCCGCCGTTGGCGCTCGGGCCGATGTTGTTGGAGTGGGGCGGTG
GCCAGCGCTGGCTGAGCGCCCGCGAAGATGCCCGCCTGGTGCGTGAGGTAGCACAGGCTGCCGGCGGACATGCCACGTTG
TTTCGTGCCCGGGGTGCTGCAGTGCCGGACGACGGCGTCTTTCATCCCATGGCGCCGGGCGTGGCGCAGATTACACGCCG
GCTCAAGCATGCGCTGGACCCTGCCGGTCTGTTCAATCCTGGCCGCATGACGCCGGACCTCTAG

Protein sequence :
MKFVLAELCDQVLTAHAAHKSVFIAGGGSKHFYGNTSALRESHFVLDMTAYRGIVSYYPSELVVTVRAGTPLAELESILA
DRGQMLAFEPPHFNDRATVGGCVAAGLAGPRRVASGGVRDYVLGARLLDSQGRWLSFGGEVMKNVAGYDVSRLLSGSLGI
FGAIVEVSLKVVPLPAAELTLQGQASQAEALQCFARWRALPLPITASAWVPDTEAGEGGRWLARLSGAPVALQAARGRMG
GEVLESVEARTFWRSLREQTHVFFQAGTPLWRLAVAPVSPPLALGPMLLEWGGGQRWLSAREDARLVREVAQAAGGHATL
FRARGAAVPDDGVFHPMAPGVAQITRRLKHALDPAGLFNPGRMTPDL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
glcE CAE85244.1 GlcE protein Not tested PAI V 536 Protein 9e-61 44