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Name : rph (BAV1936) Accession : YP_786453.1 Strain : Bordetella avium 197N Genome accession: NC_010645 Putative virulence/resistance : Unknown Product : ribonuclease PH Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0689 EC number : 2.7.7.56 Position : 2035008 - 2035742 bp Length : 735 bp Strand : - Note : RNase PH; tRNA nucleotidyltransferase; forms hexamers in Bacillus subtilis; phosphoroltic 3'-5' exoribonuclease; involved in maturation of tRNA precursors and removes terminal nucleotides near CCA acceptor arms of mature tRNAs DNA sequence : ATGACGACTTCCGACCTCTCCCTGCGCGCTGATGGCCGTGCTGTCGATACGCTGCGCGCCTTCAGCCTCAAGCGCGGATT CACGCGCTATGCCGAAGGCTCCGTGCTGGTCGTGGCGGGCAACACACAGGTCTTGTGCACGGCCAGCGTGCTCGAAAAAG TGCCGCCTTTTCTCAAGGGCAAGGGCGAGGGTTGGGTAACGGCCGAATACGGTATGTTGCCGCGCGCCACCCATACGCGT GGCGATCGCGAGGCCGCACGCGGCAAGCAGAGCGGCCGGACGCAGGAAATTCAGCGCCTTATCGGACGCAGTCTGAGGGC GGTGTTTGATCTGAAGGCGCTGGGCGAGCGCACGCTGCATCTTGATTGCGATGTGTTGCAGGCCGACGGCGGCACGCGTT GCGCCAGCATCACCGGCGCCTGGGTGGCGGCCGCCGATGCGGTGGCTTTGCTGATGGAGCGTGGCCTTTTGACGCAGAAC CCGATCCGCGATCATGTGGCCGCCGTGTCGGTGGGCCTGGTGGGCGGGCGCGCCGTGCTTGACCTGAACTACGAAGAAGA TTCGGCCTGCGAAGCGGATGTGAACGTCATCATGACCGGCGCGGGCGCCTTTGTGGAAGTGCAGGGCACTGGCGAAGAGG CGACCTTCACCCGGGCTCAGCTTGACACCATGCTGACGCTGGCCGAAGGCGGCATCGCCAAGCTGGTGGCCGAACAGCGC GCGGCGCGGGCCTAG Protein sequence : MTTSDLSLRADGRAVDTLRAFSLKRGFTRYAEGSVLVVAGNTQVLCTASVLEKVPPFLKGKGEGWVTAEYGMLPRATHTR GDREAARGKQSGRTQEIQRLIGRSLRAVFDLKALGERTLHLDCDVLQADGGTRCASITGAWVAAADAVALLMERGLLTQN PIRDHVAAVSVGLVGGRAVLDLNYEEDSACEADVNVIMTGAGAFVEVQGTGEEATFTRAQLDTMLTLAEGGIAKLVAEQR AARA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| rph | YP_001800860.1 | ribonuclease PH | Not tested | Not named | Protein | 2e-57 | 62 |
