Gene Information

Name : recG (BAV1920)
Accession : YP_786437.1
Strain : Bordetella avium 197N
Genome accession: NC_010645
Putative virulence/resistance : Resistance
Product : ATP-dependent DNA helicase RecG
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG1200
EC number : 3.6.1.-
Position : 2014564 - 2016618 bp
Length : 2055 bp
Strand : -
Note : catalyzes branch migration in Holliday junction intermediates

DNA sequence :
ATGCCAGCACCGGCCAAGGCGGACCGCGGTTCGCTGATCGAACGCCGTCTTCGCAACCTCGGTCTCGTCGAGCCCGAGGA
TTTTGTGCTGCATCTGCCGCTGCGCTATGAAGATGAAACCCGGATCATCCCGATTGCAGAGGCACGGCCCGGTTTTCCGG
CCCAGGTCGAGGGAGAGATCCTGCGTTCCGACGTGCTGTATCGTCCGCGGCGGCAATTGACGGCCGTTATCGCGGACGAT
AGCGGAGAATTGCATCTGCGCTGGCTGAACTTTTATCCCAGCCAGCAAAAACAATTGAATTCAGGGCGTCGCTTGCGCGC
CCGAGGGGATGTGCGTGGCGGCATGTTCGGGCGCGAGATGGTGCATCCGCGCATGAGCAATGCCGATGGCGCATTGCCGA
CCGCGCTCACGCCGGTATACCCGAGCACCGACGGGCTGACCCAGCCTGTGCTGCGGCGCGCCGTGACGCAGGCCTTGGCG
GGCCTGGCCCTGGATGACACCCTGCCTGAGGCGGTGCGTCAACGTTATGGGCTGCTGCCTTTCAACGAAGCGGTGCGCCT
CTTGCATGCGCCACCGCCCGGTATCGCCGAGCGCGACCTGAGCGAACGCACCCATCCCGCCTGGCGGCGCATCAAATTCG
ATGAGTTGTTGGCGCAGCAGCTCTCATTGGCCGCCGCCCGGGCGGCTCGCCACGACAAACGCGCGCCCAGCATGGCGCCT
GATACCAAGCCGGCGGGCCTGACGGCGCGTTTGTATGCGGCTTTGCCGTTCACCCTGACCGGCGCGCAGCAGCGCGTCGT
GGCCGAGATCGCTACGGATCTGGCGCGGCCTTATCCCATGCACCGCTTATTGCAAGGGGATGTGGGCAGCGGCAAAACGG
TTGTGGCCGCGGTTGCGGCGGCGCAGGCCATCGCGAATGGCTTTCAGGTGGCGCTGATGGCGCCGACCGAAATTCTGGCG
GAGCAGCATTTCCGCAAGCTTGCCGCCTGGCTGGAACCGCTGGGGGTATCGGTGGCCTGGTTGAGCGGCAGCCTGACCCT
TAAGAACCGCCGCAAGGCGGCGGAGGCGATCGAGGCAGGGGAGGTGCAATTGGTGGTGGGCACGCAGGCGCTCATCCAAG
ATCACGTGAACTTCCCTCGGCTGGGTTTGTCCATCGTGGATGAGCAACACCGCTTTGGGGTTGGCCAGCGCCTGGCCCTC
AGCCGCAAGGGTGAGGAGGCCGAAGGCCGGGTGGTGCCGCATCAACTCAGCATGAGCGCCACGCCCATTCCCCGCACTCT
GGCGATGACCTTTTTCGCGGACCTCGACGTGTCCGTGATCGACGAGCTTCCGCCTGGGCGCACGCCTGTCCTCACCAAAT
TGCTCTCCGAGGGGCGGCGAGATGAGCTTATCGCGCATATTGCCCAGGCGGCACGCGCCGGACGGCAGGCTTATTGGGTC
TGTCCGCTGGTTGAAGAAAGCGAAGCCCTGCAATTACAGACGGCGGTCGATACTTACGAAACCATGCGAGTTGAACTGCC
TGATCTGCGCGTCGGCCTGGTGCATGGCCGTTTGCCGCAGACCGAAAAAGCGGCGGTCATGGAGGCTTTTCGCGCTGGCG
ATGTCGATTTGCTGGTCGCCACCACCGTCATCGAAGTCGGGGTTGACGTGCCGAACGCCTCGCTCATGGTGATCGAACAC
GCGGAGCGCTTCGGTCTGGCGCAACTGCATCAGTTGCGTGGGCGGGTGGGGCGGGGAGAGGCCGAATCGGTTTGCGTGCT
GCTCTACCAGACCCCGCTCTCCCAGGTTGCGCGCGAGCGGCTGCGCGCGATGTTCGAGACCAGCGATGGGTTCGAGATCG
CGCGCCGTGATCTCGAACTGCGGGGGCCAGGCGAGTTTCTCGGCACGCGTCAGTCGGGCATGGAGCTTTTGCGGTTCGCC
AATATCGATCAAGACATTGAGCTGGCGGAGGCGGCGCGCGACACGGCGGCGTGGCTGCGCCAGCATGACGGCGGCGCAGT
GCAGGCGCATCTGGCGCGCTGGATGCGTGGGCGCGAGGATTTTCTCAGAACATGA

Protein sequence :
MPAPAKADRGSLIERRLRNLGLVEPEDFVLHLPLRYEDETRIIPIAEARPGFPAQVEGEILRSDVLYRPRRQLTAVIADD
SGELHLRWLNFYPSQQKQLNSGRRLRARGDVRGGMFGREMVHPRMSNADGALPTALTPVYPSTDGLTQPVLRRAVTQALA
GLALDDTLPEAVRQRYGLLPFNEAVRLLHAPPPGIAERDLSERTHPAWRRIKFDELLAQQLSLAAARAARHDKRAPSMAP
DTKPAGLTARLYAALPFTLTGAQQRVVAEIATDLARPYPMHRLLQGDVGSGKTVVAAVAAAQAIANGFQVALMAPTEILA
EQHFRKLAAWLEPLGVSVAWLSGSLTLKNRRKAAEAIEAGEVQLVVGTQALIQDHVNFPRLGLSIVDEQHRFGVGQRLAL
SRKGEEAEGRVVPHQLSMSATPIPRTLAMTFFADLDVSVIDELPPGRTPVLTKLLSEGRRDELIAHIAQAARAGRQAYWV
CPLVEESEALQLQTAVDTYETMRVELPDLRVGLVHGRLPQTEKAAVMEAFRAGDVDLLVATTVIEVGVDVPNASLMVIEH
AERFGLAQLHQLRGRVGRGEAESVCVLLYQTPLSQVARERLRAMFETSDGFEIARRDLELRGPGEFLGTRQSGMELLRFA
NIDQDIELAEAARDTAAWLRQHDGGAVQAHLARWMRGREDFLRT

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
recG CAJ77039.1 ATP-dependent DNA helicase Not tested AbaR1 Protein 2e-96 45

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
recG YP_786437.1 ATP-dependent DNA helicase RecG BAC0356 Protein 2e-144 54