Gene Information

Name : cadR (BAV1633)
Accession : YP_786153.1
Strain : Bordetella avium 197N
Genome accession: NC_010645
Putative virulence/resistance : Resistance
Product : MerR family transcriptional regulator
Function : -
COG functional category : K : Transcription
COG ID : COG0789
EC number : -
Position : 1707187 - 1707621 bp
Length : 435 bp
Strand : +
Note : -

DNA sequence :
ATGAAGATCGGTGAATTAGCCAAGGCGGCTGCCACGTCTGCGGAAACCGTGCGCTACTACGAGCGTGAGGGCTTGCTGCC
TGCGCCGCAGCGGGGCTTGAATAACTACCGCAGTTACGGGCAAGTGCATCTGGAGCGCCTGCGCCTGATCCGCAATTGCC
GGGCCCTGGACATGACTCAGGACGAGATCCGCGCGATTCTGAATCTGGCCGACCACCACCAGGCGGGTTGTGGGGCGCTC
AATGCTTTGTTTGATGAGCACATTGCGCATGTGGATGCCCGTATTGCCGAATTGGCTCAACTGAAGCAGCAACTCACTGA
GCTGCGGCAGCGCTGTGCATCGGCGCGACCTGACGTGGATGACTGCGGGATTCTGCACGGTTTGGCAGAAATGCAGCTTG
AGGAGCGGCCCGAGCGTCAGACGCATCTGGGTTGA

Protein sequence :
MKIGELAKAAATSAETVRYYEREGLLPAPQRGLNNYRSYGQVHLERLRLIRNCRALDMTQDEIRAILNLADHHQAGCGAL
NALFDEHIAHVDARIAELAQLKQQLTELRQRCASARPDVDDCGILHGLAEMQLEERPERQTHLG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF C98 AAN62191.1 putative transcriptional regulator Not tested PAGI-2(C) Protein 2e-30 55
ACICU_00234 YP_001844893.1 transcriptional regulator Not tested AbaR20 Protein 1e-29 44
cadR ADZ05769.1 MerR family transcriptional regulator Not tested AbaR11 Protein 2e-29 44
cadR ACS32041.1 MerR family transcriptional regulator Not tested AbaR5 Protein 3e-29 44
cadR ACN81029.1 MerR family transcriptional regulator Not tested AbaR5 Protein 1e-29 44
pbrR CAJ77021.1 transcription regulator Not tested AbaR1 Protein 2e-29 44
pbrR CAJ77094.1 Transcriptional regulator Not tested AbaR1 Protein 8e-30 44
cadR AGK36653.1 MerR family transcriptional regulator Not tested AbaR26 Protein 8e-30 44

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
cadR YP_786153.1 MerR family transcriptional regulator BAC0058 Protein 5e-34 54
cadR YP_786153.1 MerR family transcriptional regulator BAC0301 Protein 3e-28 54