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Name : hslU (BAV0142) Accession : YP_784680.1 Strain : Bordetella avium 197N Genome accession: NC_010645 Putative virulence/resistance : Unknown Product : ATP-dependent protease ATP-binding subunit HslU Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG1220 EC number : - Position : 146060 - 147394 bp Length : 1335 bp Strand : - Note : heat shock protein involved in degradation of misfolded proteins DNA sequence : ATGTCTGCATCGACCATGACGCCCGGAGAAATCGTCTCCGAGCTCGATAAATACATCATCGGCCAAAACCGCGCCAAACG TGCCGTCGCTGTCGCGTTGCGCAACCGCTGGCGCCGCCAGCAGGTCGCCGACCCCCTGCGCCACGAGATTCATCCGAAAA ATATTCTCATGATCGGCCCGACGGGCGTCGGCAAGACCGAGATCGCCCGCCGCCTGGCCAAGCTGGCCAATGCGCCCTTC ATCAAGATCGAAGCGACCAAGTTCACGGAAGTGGGCTATGTGGGCCGCGACGTCGATACCATCATCCGCGACCTGACCGA GTTCTCGATCAAACAGACACGCGAACTGGAAATGCGCCGCGTGCGCAGCCACGCCGAAGATGCTGCTGAAGACCGCATTC TCGACGTACTGGTCCCGCCGGCGCGCAATGCCATGGGCGAACCCCAGCGCGATGATGGCAACACCACGCGCCAGACTTTT CGTAAACGCCTGCGCGAAGGCTCGTTGGACGATCTCGAAATTGAAATCGACATCGCCCAGGCCACGCCTCAGCTCGACGT CATGACGCCTCCGGGCATGGAAGAAATGGCCGAGCAGTTGCGCGGCATGTTCGCCGGCCTAGCACGCGACAAGACCAAGC CCAAGAAAATCAAGGTCAAGGAGGCGTTCAAACTCATCATCGAGGAAGAAGCCGCCAAGCGCGTCAATGAGGATGACCTG CGTGCCGCCGCCATCGCGAACGTCGAGCAAAACGGCATTGTTTTCCTGGACGAAATCGACAAAATCGCCGCCCGCCAGGA AAGTGGCGGCGCGGATGTGTCGCGTCAAGGTGTACAACGCGATTTGTTGCCTCTGGTGGAAGGCACGACGGTCAACACCC GCTATGGCATGGTGCGCACCGACCACATCCTGTTCATCGCCTCGGGCGCTTTCCATTTATCGCGCCCCTCGGATCTGATC CCTGAACTCCAGGGCCGCTTCCCGATTCGCGTCGAACTGGATTCCCTGTCGGCAGATGATTTTGTACGTATTTTGTCCGA AACCGACGCGTCCTTGGTCAAACAATATACGGCGTTGCTGGCCACTGAAGACGTGCAGCTAGCATTCACCGAAGACGGCA TCAAGCGTCTGGCGGAGCTGGCCTTCTCGGTCAATGAGCGCACGGAAAATATCGGCGCGCGCCGCCTGTACACCGTGATG GAAAAACTGCTCGAAGAGCTGTCTTTCGATGCGGGCGCCAGCAGCGGTCAGAGCGTAACGATCGATGCTGCCTATGTTGA TGCGCAACTGTCGGAAGCCGCATCCAGCCAGGATCTGGCGCGCTACGTGCTCTAG Protein sequence : MSASTMTPGEIVSELDKYIIGQNRAKRAVAVALRNRWRRQQVADPLRHEIHPKNILMIGPTGVGKTEIARRLAKLANAPF IKIEATKFTEVGYVGRDVDTIIRDLTEFSIKQTRELEMRRVRSHAEDAAEDRILDVLVPPARNAMGEPQRDDGNTTRQTF RKRLREGSLDDLEIEIDIAQATPQLDVMTPPGMEEMAEQLRGMFAGLARDKTKPKKIKVKEAFKLIIEEEAAKRVNEDDL RAAAIANVEQNGIVFLDEIDKIAARQESGGADVSRQGVQRDLLPLVEGTTVNTRYGMVRTDHILFIASGAFHLSRPSDLI PELQGRFPIRVELDSLSADDFVRILSETDASLVKQYTALLATEDVQLAFTEDGIKRLAELAFSVNERTENIGARRLYTVM EKLLEELSFDAGASSGQSVTIDAAYVDAQLSEAASSQDLARYVL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hslU | YP_003728753.1 | heat shock protein HslU | Not tested | cag PAI | Protein | 4e-100 | 47 |
