Gene Information

Name : Emin_0058 (Emin_0058)
Accession : YP_001874962.1
Strain : Elusimicrobium minutum Pei191
Genome accession: NC_010644
Putative virulence/resistance : Virulence
Product : lysyl-tRNA synthetase
Function : -
COG functional category : J : Translation, ribosomal structure and biogenesis
COG ID : COG1190
EC number : 6.1.1.6
Position : 64380 - 65876 bp
Length : 1497 bp
Strand : +
Note : KEGG: chy:CHY_2365 lysyl-tRNA synthetase; TIGRFAM: lysyl-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S); tRNA synthetase class II (D K and N); nucleic acid binding OB-fold tRNA/helicase-type

DNA sequence :
ATGACAGAAAACAATGAACAGAAATTACAAAATTCTTTACAAGAAATAATTTCCCAAAGATATAAAGAAGCGCAGGAATT
AAAAGAAGTCGGTATTAATCCTTATCCCGCGAGAAGCGGCGCCGAGAACAGAGCCAAAGAAGCGCTTGACGCTGATATTG
ACACTCAGGTTACCGTATCGGGACGTGTTGTCCAGCTCCGCCTTATGGGAAAAGCGGCTTTCGCACATATAAGGGATTTT
ACAGGCAAAGTACAGTTTTACGCTCAGAAAGATACTCTTGGGGAGGAAAATTATAATTTTTTTAAAAAACATATTTCAGT
AGGTGATTTTGTTACGGTAAAAGGCCACATGTTTTTAACAAAAACGGGTGAAAAAACAATTAAGGCCGACAGCATTACCT
TAATTTCCAAAGCTATAAGGCCCATGCCTGAAAAATGGCACGGCGTGCAGGATACTGAAATAAGGTTCAGAAACCGCCAC
GTGGATTTAATTGCCAATGAAGATATTAAAGAAATTTTTGTAAAACGCTCCAAAATCATCAGTTCAATAAGAAAAACTTT
AGACGGGCTTGGTTATTTGGAGGTTGAAACCCCGACCTTAACTCCCGACGCGGGCGGCGCTATAGCCAGACCTTTTGAAA
CTTTCCATAACGCTCTTAAAATGCCGCTTTACATGCGCATAGCTTTGGAACTTTACCACAAACGTCTTATTGTCGGCGGA
CTCGACAGAATTTATGAAATAGGTAAAATGTTCCGTAACGAAGGTATTGATACTACGCATAATCCTGAGTTTACCATGAT
GGAGCTTTACCAGGCCTACGGCGATGTTAACACAATGGCTGATGTTTTTGAAGCCGTTTTGGCAAACGCGGCCGAAGCTA
TAGGCGCGGAAAAAGTTACTTTTAAAGGTAAAGAAGTTAATTTAAAACCGCCTTATGAAAGGGTTTCTATGCCTGAAGCA
TGGCAGAAATACGTTGGTGAAGATATTCACAATATTTTAGACGGGCGTGATTTTAAAAGGGCCGAGCTTATCGCCCTTGC
CAAACGCCTGGGATTAAAAGTTGACGAAGAGGAATCGAGCGGTAAAATTTTTGACATGATTTTTGACGAAAGAATTATTG
TTAACTACACAAACCCGATGTTAATGATGGATTACCCCACGGCGGTAAGTCCGTTTTCCAAAACCAAAGAGGGTGATTCG
GCCATTGTTGAACGTTTTGAAGCTTTTGTTTGCGGAAGCGAGCTTGGCAACGCGTATACCGAGATTAACGACCCCGCCGA
CCAAGCCCAGCGTCTTAAAGACCAGGCCGCCCAAAAAGCCAAAGACAATGAAGATAATTCCGAAATTGTCGACACTGCTT
ATATTGAGGCATTGGAGTCGGGCATGCCGCCTACAGGCGGTATGGGCATAGGCATTGACCGAATGATAATGTTACTTACC
GGCCAGGACTCAATTAGAGAAATTGTGTTTTTCCCTCTTCTTAAAAAATTAGATTAA

Protein sequence :
MTENNEQKLQNSLQEIISQRYKEAQELKEVGINPYPARSGAENRAKEALDADIDTQVTVSGRVVQLRLMGKAAFAHIRDF
TGKVQFYAQKDTLGEENYNFFKKHISVGDFVTVKGHMFLTKTGEKTIKADSITLISKAIRPMPEKWHGVQDTEIRFRNRH
VDLIANEDIKEIFVKRSKIISSIRKTLDGLGYLEVETPTLTPDAGGAIARPFETFHNALKMPLYMRIALELYHKRLIVGG
LDRIYEIGKMFRNEGIDTTHNPEFTMMELYQAYGDVNTMADVFEAVLANAAEAIGAEKVTFKGKEVNLKPPYERVSMPEA
WQKYVGEDIHNILDGRDFKRAELIALAKRLGLKVDEEESSGKIFDMIFDERIIVNYTNPMLMMDYPTAVSPFSKTKEGDS
AIVERFEAFVCGSELGNAYTEINDPADQAQRLKDQAAQKAKDNEDNSEIVDTAYIEALESGMPPTGGMGIGIDRMIMLLT
GQDSIREIVFFPLLKKLD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD66193.1 putative lysil-tRNA synthetase LysU Not tested PAI III 536 Protein 7e-74 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Emin_0058 YP_001874962.1 lysyl-tRNA synthetase VFG1668 Protein 4e-74 41