|
Name : Emin_1009 (Emin_1009) Accession : YP_001875899.1 Strain : Elusimicrobium minutum Pei191 Genome accession: NC_010644 Putative virulence/resistance : Virulence Product : lysine decarboxylase Function : - COG functional category : E : Amino acid transport and metabolism COG ID : COG1982 EC number : 4.1.1.18 Position : 1098420 - 1100300 bp Length : 1881 bp Strand : - Note : PFAM: Orn/Lys/Arg decarboxylase major region; Orn/Lys/Arg decarboxylase domain protein; KEGG: smd:Smed_5196 lysine decarboxylase DNA sequence : GTGGACAGCGATAAAAAAAAAGAAGCCGCGCCTTTTTTTAAGGCGTTAAAAAATTTTGCCCTTACAAAGGCCGATATGTG GAGCACTCCGGGCCACGGCGGCGGGCAGGGCCTTAAATCAAGCGTATTGGGGCGTGAATTTTACGAGTTTTTCGGAAAGA ATATTTTCCGCGCCGATATATCAAGCAGCGTTCCTTCTTTAGGCACTATTTTAGACCATGAAGGCGCCGCGGAAGACGCC GAGAAAAACGCGGCGGAAATATTCGGCGCGGACACGACGTTTTTTGTTCTTAATGGCACCTCAACCGCTAATAAAGTGGT GTTTTTCGCCACCTGCGCGCCGGGAGATATTGTGCTTGTCGGGCGCAACTGCCATAAGTCGATAATGCATTCCATTATTT TAAATGAGGTAACTCCCATTTATCTAAAACCGGCAAAAAATTCTTACGGGCTTATAGGCCCGGTACCTCAAAGCGAGTTT ACGCATGAGGCTATTAAACAAAAAATAAAAGAAAGCCCCATAGTAACAAACAAAAGAATACGCAAAGTGCAGCTTACGGT TTTAACAAACTCCACATACGACGGGCTTATCTATGACGTCGATAAAATAAAAGAAAAAATGTCCGCGCTTACACATTTTT TACATTTTGACGAGGCCTGGTATGCTTACGGACACTTTCACCCTTTTTACGCTAACCGCTACGCTATGAGTCCGTATCAA AAAAAACGCGGCGTAAAAAGGCCGCCGGTTTTTGCCACGCAGTCAACGCATAAACTTTTGTGGGCGTTTTCCCAAGGTTC AATGCTTCATTATAAAATGGGAACGAATAAATTTGAGCTTGACGTGCAGGGTTTAAAAGAAGCCAACCTGTTCCACGCCA GCACATCGCCTTTTTACCCGTTGTTCGCCTCAATAGATATTTCCGCCGCTATAATGGATTCCGACGGGGAAAAACTTATG GGCAAAGCCTTGGACGAGGCCATTAAATTCAGAAAAGAAATTATTAACAGATATAAAAAACATAAAAAAGCCGACAGTTG GTATTTTGAACTTTGGCAGCAGGAAATGAAGCTAAAACATGTTAACAAAGATCCTAAAAACTGGATTATTGACGGTTCGG AACCTTGGCACGGATTTGAAGGGTTGGAAAAAGAAAATGTTTTGCTTGATCCTTTAAAAGTAACTTTGCTTACCCCGGGT ATTGAGGAGAACGGCGAAATGCAGCCCTTTGGTATACCGGCAAGTATAGTAAGCAAATTTTTAAATACCCGAAAAATTAT ACCTGAAAAAACAGGTTTTTATAATATTCTTTTCTTATTCGCGCCCGGCGTGGGCGAACAAAAAGAGGAAAGGCTTGTTA AAGCGCTTGACGAGTTTAAAACGCTTTATGACAGAAATGAGCCTATATCCGGTATTTTTCCTGAGTTAATTAATGATTAT CCGCATATTTATACACCGGAAATGGGGTTAAAAGATTTAGCTAATAAAGTGCATGATTTTTTATATATCAACCAAATATT TGAAATTATTCCCAAAATGTATAATGATTTGCCCGAGCAGGTTATGGCCCCGCACAAGGCTTATTACGGCCTTGTTGACA GTAAGGCCGAATACTTAAGCCTTGATGAAATAGCTGGCAGAGTAGCCGTCTTTATGATTTTGCCTTACCCGCCCGGAATA CCGCTTATAATGCCGGGGGAAAGGTTTCCCCAAAGCGGCGGCATACTTGACTTTTTGCGCATGAGTGAGAGGTTTGATAA TATGTTCCCGGGTTTTTCAACGGAGTTTCATGGCGTTAAAAAGATTGAAAATGAGGACGGCAAAATTGAATATAGAATAA GCTGCCTTAAAAGGTCTAAAAAAGAGGCCGCGGCGCAGTAG Protein sequence : MDSDKKKEAAPFFKALKNFALTKADMWSTPGHGGGQGLKSSVLGREFYEFFGKNIFRADISSSVPSLGTILDHEGAAEDA EKNAAEIFGADTTFFVLNGTSTANKVVFFATCAPGDIVLVGRNCHKSIMHSIILNEVTPIYLKPAKNSYGLIGPVPQSEF THEAIKQKIKESPIVTNKRIRKVQLTVLTNSTYDGLIYDVDKIKEKMSALTHFLHFDEAWYAYGHFHPFYANRYAMSPYQ KKRGVKRPPVFATQSTHKLLWAFSQGSMLHYKMGTNKFELDVQGLKEANLFHASTSPFYPLFASIDISAAIMDSDGEKLM GKALDEAIKFRKEIINRYKKHKKADSWYFELWQQEMKLKHVNKDPKNWIIDGSEPWHGFEGLEKENVLLDPLKVTLLTPG IEENGEMQPFGIPASIVSKFLNTRKIIPEKTGFYNILFLFAPGVGEQKEERLVKALDEFKTLYDRNEPISGIFPELINDY PHIYTPEMGLKDLANKVHDFLYINQIFEIIPKMYNDLPEQVMAPHKAYYGLVDSKAEYLSLDEIAGRVAVFMILPYPPGI PLIMPGERFPQSGGILDFLRMSERFDNMFPGFSTEFHGVKKIENEDGKIEYRISCLKRSKKEAAAQ |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAD66195.1 | putative cadaverin decarboxylase | Virulence | PAI III 536 | Protein | 5e-108 | 42 |
| cadA | NP_756988.1 | lysine decarboxylase, inducible | Not tested | PAI II CFT073 | Protein | 8e-111 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Emin_1009 | YP_001875899.1 | lysine decarboxylase | VFG1670 | Protein | 3e-108 | 42 |
