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Name : YPTS_4292 (YPTS_4292) Accession : YP_001874692.1 Strain : Genome accession: NC_010635 Putative virulence/resistance : Virulence Product : YscU/HrpY family type III secretion protein Function : - COG functional category : U : Intracellular trafficking, secretion and vesicular transport COG ID : COG4792 EC number : - Position : 66887 - 67951 bp Length : 1065 bp Strand : + Note : TIGRFAM: type III secretion protein, YscU/HrpY family; PFAM: type III secretion exporter; KEGG: ypa:YPA_CD0015 type III secretion protein DNA sequence : ATGAGCGGAGAAAAGACAGAGCAACCCACCCCGAAGAAAATCCGTGATGCGCGCAAAAAGGGACAGGTAGCGAAAAGTAA GGAAGTGGTCTCTACTGCGCTTATCGTCGCGCTGAGTGCGATGTTAATGGGGCTTTCTGACTACTATTTCGAGCATTTTA GTAAGCTGATGCTAATCCCCGCAGAGCAGAGCTATCTTCCTTTCTCGCAGGCGCTTAGCTATGTGGTTGACAATGTGTTG CTCGAGTTTTTTTATCTCTGTTTTCCTTTGTTAACAGTGGCGGCATTAATGGCGATCGCATCTCATGTTGTGCAGTATGG TTTTCTTATAAGTGGTGAAGCAATTAAACCGGATATTAAAAAAATCAATCCAATAGAGGGTGCCAAGCGTATCTTTTCCA TCAAAAGTTTAGTGGAGTTTCTCAAATCCATTCTCAAGGTTGTTTTGCTCAGTATACTCATCTGGATAATCATTAAGGGA AATCTAGTCACACTCTTGCAGTTGCCAACCTGTGGAATTGAATGTATTACCCCTTTATTGGGGCAAATACTCCGGCAGTT GATGGTTATCTGTACTGTTGGCTTTGTGGTCATCTCCATAGCCGACTATGCCTTTGAATACTATCAATATATTAAGGAAC TTAAAATGAGCAAGGATGAGATCAAACGCGAGTACAAAGAAATGGAGGGTAGCCCAGAAATCAAAAGCAAGCGTCGTCAG TTTCATCAAGAGATCCAATCGAGGAACATGCGGGAAAATGTTAAACGCTCATCAGTGGTGGTAGCTAATCCGACCCATAT TGCTATTGGTATTCTTTACAAGCGAGGGGAAACACCACTACCGTTGGTAACATTCAAATATACCGATGCCCAAGTTCAGA CTGTGCGCAAAATAGCAGAAGAAGAAGGGGTGCCTATTTTACAACGTATCCCATTAGCCCGTGCTCTTTATTGGGATGCG CTCGTCGATCACTATATTCCGGCTGAGCAAATAGAGGCCACAGCTGAAGTGCTACGATGGCTAGAAAGGCAAAATATCGA GAAACAACATTCCGAAATGTTATAA Protein sequence : MSGEKTEQPTPKKIRDARKKGQVAKSKEVVSTALIVALSAMLMGLSDYYFEHFSKLMLIPAEQSYLPFSQALSYVVDNVL LEFFYLCFPLLTVAALMAIASHVVQYGFLISGEAIKPDIKKINPIEGAKRIFSIKSLVEFLKSILKVVLLSILIWIIIKG NLVTLLQLPTCGIECITPLLGQILRQLMVICTVGFVVISIADYAFEYYQYIKELKMSKDEIKREYKEMEGSPEIKSKRRQ FHQEIQSRNMRENVKRSSVVVANPTHIAIGILYKRGETPLPLVTFKYTDAQVQTVRKIAEEEGVPILQRIPLARALYWDA LVDHYIPAEQIEATAEVLRWLERQNIEKQHSEML |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| lscU | AAO18037.1 | LscU | Virulence | TTSS locus | Protein | 2e-115 | 73 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| YPTS_4292 | YP_001874692.1 | YscU/HrpY family type III secretion protein | VFG0397 | Protein | 8e-157 | 100 |
| YPTS_4292 | YP_001874692.1 | YscU/HrpY family type III secretion protein | VFG0185 | Protein | 3e-96 | 67 |
