Gene Information

Name : YPTS_4284 (YPTS_4284)
Accession : YP_001874684.1
Strain :
Genome accession: NC_010635
Putative virulence/resistance : Virulence
Product : type III secretion regulator YopN/LcrE/InvE/MxiC
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 60041 - 60922 bp
Length : 882 bp
Strand : -
Note : TIGRFAM: type III secretion regulator YopN/LcrE/InvE/MxiC; PFAM: Hypersensitivity response secretion HrpJ domain protein; KEGG: yps:pYV0065 YopN, LcrE; putative membrane-bound Yop targeting protein

DNA sequence : 
ATGACGACGCTTCATAACCTATCTTATGGCAATACCCCGCTGCATAATGAGCGTCCAGAGATTGCCAGTAGTCAGATCGT
AAATCAGACTCTGGGTCAATTTCGGGGAGAATCTGTGCAGATAGTCAGCGGCACTCTGCAGTCTATAGCTGATATGGCAG
AAGAGGTAACATTTGTCTTCTCCGAGCGTAAGGAGCTCTCCCTCGACAAACGCAAATTAAGTGACAGCCAGGCTCGAGTT
AGCGACGTTGAGGAGCAGGTTAATCAATACCTTAGCAAAGTTCCAGAGTTGGAACAAAAACAGAATGTGAGTGAGCTGCT
CAGTCTGTTGAGTAACAGCCCCAATATAAGCTTGTCCCAGTTAAAGGCTTATCTGGAGGGGAAATCAGAAGAACCGAGTG
AGCAATTCAAAATGCTCTGCGGCTTGCGTGATGCCCTGAAAGGGCGCCCTGAATTAGCACATCTTTCGCATTTGGTTGAA
CAAGCTCTGGTCAGCATGGCTGAAGAGCAAGGAGAAACCATTGTATTGGGTGCCAGGATAACCCCGGAAGCGTACAGAGA
ATCCCAGTCGGGTGTTAATCCACTGCAGCCGCTCCGTGATACCTACCGCGATGCAGTGATGGGTTATCAAGGAATTTATG
CGATCTGGAGTGATTTACAAAAACGTTTTCCTAATGGGGATATAGACTCGGTGATATTATTCCTGCAAAAGGCGCTTAGT
GCAGATCTACAAAGTCAACAAAGCGGGTCTGGACGGGAAAAATTAGGAATAGTTATTAATGACTTACAGAAGCTAAAGGA
GTTTGGTAGCGTGAGTGACCAAGTTAAAGGATTTTGGCAATTTTTTTCAGAGGGTAAAACTAATGGCGTACGACCTTTCT
GA

Protein sequence : 
MTTLHNLSYGNTPLHNERPEIASSQIVNQTLGQFRGESVQIVSGTLQSIADMAEEVTFVFSERKELSLDKRKLSDSQARV
SDVEEQVNQYLSKVPELEQKQNVSELLSLLSNSPNISLSQLKAYLEGKSEEPSEQFKMLCGLRDALKGRPELAHLSHLVE
QALVSMAEEQGETIVLGARITPEAYRESQSGVNPLQPLRDTYRDAVMGYQGIYAIWSDLQKRFPNGDIDSVILFLQKALS
ADLQSQQSGSGREKLGIVINDLQKLKEFGSVSDQVKGFWQFFSEGKTNGVRPF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
lopN AAO18045.1 LopN Virulence TTSS locus Protein 3e-52 49

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
YPTS_4284 YP_001874684.1 type III secretion regulator YopN/LcrE/InvE/MxiC VFG0389 Protein 4e-124 99
YPTS_4284 YP_001874684.1 type III secretion regulator YopN/LcrE/InvE/MxiC VFG0193 Protein 5e-50 48