Gene Information

Name : YPTS_4282 (YPTS_4282)
Accession : YP_001874682.1
Strain :
Genome accession: NC_010635
Putative virulence/resistance : Virulence
Product : type III secretion chaperone SycN
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 59424 - 59795 bp
Length : 372 bp
Strand : -
Note : TIGRFAM: type III secretion chaperone SycN; KEGG: ypa:YPA_CD0025 type III secretion protein

DNA sequence : 
GTGAGTTGGATTGAACCCATCATTTCCCATTTCTGCCAGGATCTGGGAGTGCCAACATCTAGCCCCCTTTCGCCTCTTAT
TCAATTAGAGATGGCTCAATCTGGCACGCTGCAACTGGAACAACATGGTGCGACACTGACATTGTGGTTAGCGCGTTCTC
TTGCCTGGCACCGGTGTGAAGATGCTATGGTCAAAGCGCTAACGCTCACGGCGGCCCAAAAGAGTGGCGCTTTACCGCTG
CGAGCGGGGTGGTTAGGGGAAAGTCAGCTGGTGTTATTTGTCTCGCTTGATGAGCGTTCCTTAACCTTGCCCCTTTTACA
TCAAGCTTTCGAACAGTTACTGCGATTGCAGCAAGAGGTGCTTGCGCCGTGA

Protein sequence : 
MSWIEPIISHFCQDLGVPTSSPLSPLIQLEMAQSGTLQLEQHGATLTLWLARSLAWHRCEDAMVKALTLTAAQKSGALPL
RAGWLGESQLVLFVSLDERSLTLPLLHQAFEQLLRLQQEVLAP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
lssN AAO18047.1 LssN Virulence TTSS locus Protein 3e-32 59

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
YPTS_4282 YP_001874682.1 type III secretion chaperone SycN VFG0387 Protein 2e-51 100
YPTS_4282 YP_001874682.1 type III secretion chaperone SycN VFG0195 Protein 8e-26 48