Gene Information

Name : YPTS_4281 (YPTS_4281)
Accession : YP_001874681.1
Strain :
Genome accession: NC_010635
Putative virulence/resistance : Virulence
Product : YscX family type III secretion protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 59059 - 59427 bp
Length : 369 bp
Strand : -
Note : TIGRFAM: type III secretion protein, YscX family; PFAM: type III secretion system YscX family protein; KEGG: ypa:YPA_CD0026 type III secretion protein

DNA sequence : 
GTGAGTCGCATAATAACTGCCCCCCATATTGGCATCGAAAAACTGTCGGCGATTAGCCTGGAAGAGCTATCCTGTGGCTT
GCCTGAACGTTATGCCTTGCCGCCTGATGGGCATCCAGTCGAACCACATTTAGAGCGCCTTTACCCTACAGCACAAAGCA
AGCGTAGCCTATGGGACTTTGCTTCTCCCGGCTATACATTTCATGGATTACATCGAGCTCAAGATTATCGGCGCGAACTG
GATACCTTGCAGTCACTGCTAACCACCAGTCAGTCCTCAGAGCTACAAGCTGCCGCGGCGCTGCTTAAATGCCAACAAGA
TGATGATCGGTTACTGCAAATAATCCTTAACCTGTTGCACAAAGTATGA

Protein sequence : 
MSRIITAPHIGIEKLSAISLEELSCGLPERYALPPDGHPVEPHLERLYPTAQSKRSLWDFASPGYTFHGLHRAQDYRREL
DTLQSLLTTSQSSELQAAAALLKCQQDDDRLLQIILNLLHKV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
lssB AAO18048.1 LssB Virulence TTSS locus Protein 6e-18 47

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
YPTS_4281 YP_001874681.1 YscX family type III secretion protein VFG0386 Protein 8e-39 100
YPTS_4281 YP_001874681.1 YscX family type III secretion protein VFG0196 Protein 5e-14 50