Gene Information

Name : YPTS_4280 (YPTS_4280)
Accession : YP_001874680.1
Strain :
Genome accession: NC_010635
Putative virulence/resistance : Virulence
Product : type III secretion protein
Function : -
COG functional category : R : General function prediction only
COG ID : COG4783
EC number : -
Position : 58718 - 59062 bp
Length : 345 bp
Strand : -
Note : KEGG: ypa:YPA_CD0027 type III secretion protein

DNA sequence : 
ATGAATATTACTTTAACCAAACGACAACAGGAGTTCTTGCTGCTCAACGGTTGGTTACAACTACAATGTGGCCATGCAGA
GCGCGCATGTATTCTATTGGACGCCTTGCTGACGTTAAATCCTGAGCATTTAGCCGGTCGGCGTTGCCGATTAGTCGCGC
TACTTAATAATAACCAGGGAGAACGTGCCGAAAAAGAAGCGCAATGGCTAATATCACATGACCCTTTACAGGCTGGGAAT
TGGCTCTGTTTGAGCCGCGCCCAACAACTGAACGGCGATCTTGATAAGGCTCGCCATGCTTATCAACATTATTTGGAGTT
GAAAGATCATAATGAATCCCCATGA

Protein sequence : 
MNITLTKRQQEFLLLNGWLQLQCGHAERACILLDALLTLNPEHLAGRRCRLVALLNNNQGERAEKEAQWLISHDPLQAGN
WLCLSRAQQLNGDLDKARHAYQHYLELKDHNESP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
lssC AAO18049.1 LssC Virulence TTSS locus Protein 9e-13 52

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
YPTS_4280 YP_001874680.1 type III secretion protein VFG0385 Protein 3e-47 100
YPTS_4280 YP_001874680.1 type III secretion protein VFG0197 Protein 9e-05 46