Gene Information

Name : YPTS_4212 (YPTS_4212)
Accession : YP_001874612.1
Strain :
Genome accession: NC_010635
Putative virulence/resistance : Virulence
Product : YscG family type III secretion protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4413 - 4760 bp
Length : 348 bp
Strand : +
Note : TIGRFAM: type III secretion protein, YscG family; PFAM: Type III secretion system YscG family protein; KEGG: yps:pYV0083 YscG; putative type III secretion protein

DNA sequence :
ATGAAATATAAACTCAACGTACTGTTAGCAGAGATTGCTCTGATTGGAACCGGCAACCACTGCCACGAAGAAGCGAATTG
CATTGCTGAATGGTTACATTTGAAAGGTGAAGAAGAGGCGGTTCAATTGATTCGCCTTTCCTCTTTGATGAACCGTGGGG
ACTACGCAAGCGCCTTGCAACAAGGAAATAAATTAGCTTATCCTGATTTGGAACCTTGGTTAGCCTTATGTGAATATCGC
CTCGGGTTGGGGAGCGCCTTAGAGTCACGTTTAAATCGTCTCGCAAGGAGTCAGGATCCTAGAATACAGACATTTGTGAA
TGGAATGAGGGAGCAACTAAAAACATGA

Protein sequence :
MKYKLNVLLAEIALIGTGNHCHEEANCIAEWLHLKGEEEAVQLIRLSSLMNRGDYASALQQGNKLAYPDLEPWLALCEYR
LGLGSALESRLNRLARSQDPRIQTFVNGMREQLKT

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
lscG AAO18030.1 LscG Virulence TTSS locus Protein 3e-28 61

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
YPTS_4212 YP_001874612.1 YscG family type III secretion protein VFG0406 Protein 4e-48 99
YPTS_4212 YP_001874612.1 YscG family type III secretion protein VFG0215 Protein 5e-25 54