Gene Information

Name : YPTS_4265 (YPTS_4265)
Accession : YP_001874665.1
Strain :
Genome accession: NC_010635
Putative virulence/resistance : Virulence
Product : cysteine protease domain-containing protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 43867 - 44835 bp
Length : 969 bp
Strand : +
Note : TIGRFAM: cysteine protease domain protein, YopT-type; PFAM: peptidase C58 Yersinia/Haemophilus virulence surface antigen; KEGG: yps:pYV0041 yop targeted effector YopT

DNA sequence : 
ATGAACAGTATTCACGGACACTACCATATTCAACTATCGAATTATTCTGCCGGTGAAAACCTTCAATCAGCTACCCTCAC
CGAAGGGGTGATTGGCGCACACCGAGTGAAAGTGGAAACAGCACTGTCACACTCAAACCTGCAGAAAAAGTTATCAGCCA
CCATAAAACATAACCAGTCAGGCCGTTCTATGCTGGATAGAAAGTTGACCAGCGACGGCAAAGCTAACCAACGCAGCAGC
TTTACCTTCAGTATGATTATGTATCGCATGATACATTTTGTACTCAGCACTCGTGTGCCCGCGGTGAGAGAGTCTGTTGC
AAATTACGGAGGTAACATCAATTTCAAGTTTGCTCAGACCAAAGGGGCTTTTCTTCATAAAATAATAAAACATTCAGACA
CTGCTAGCGGTGTCTGTGAGGCTTTATGTGCACATTGGATCAGGAGCCATGCACAAGGCCAAAGCTTATTTGACCAGCTC
TATGTTGGCGGGCGTAAGGGGAAATTCCAGATCGATACACTTTACTCAATTAAACAGTTGCAAATAGATGGTTGTAAAGC
AGACGTTGATCAAGATGAGGTAACACTAGATTGGTTCAAGAAAAATGGCATATCAGAACGTATGATTGAACGGCATTGCT
TACTGCGTCCAGTTGATGTTACTGGTACGACGGAATCAGAAGGGCTGGATCAATTATTAAACGCTATCCTTGATACTCAT
GGGATAGGTTACGGTTATAAAAAAATACATCTCTCAGGCCAAATGTCAGCCCACGCCATAGCGGCGTATGTCAACGAAAA
GAGTGGTGTTACTTTCTTCGATCCCAATTTCGGTGAATTCCACTTTTCTGATAAGGAAAAGTTCCGCAAATGGTTTACTA
ACTCATTCTGGGATAATTCTATGTATCATTATCCTCTGGGGGTGGGGCAGCGTTTTAGAGTGTTAACATTTGACTCCAAG
GAGGTTTAA

Protein sequence : 
MNSIHGHYHIQLSNYSAGENLQSATLTEGVIGAHRVKVETALSHSNLQKKLSATIKHNQSGRSMLDRKLTSDGKANQRSS
FTFSMIMYRMIHFVLSTRVPAVRESVANYGGNINFKFAQTKGAFLHKIIKHSDTASGVCEALCAHWIRSHAQGQSLFDQL
YVGGRKGKFQIDTLYSIKQLQIDGCKADVDQDEVTLDWFKKNGISERMIERHCLLRPVDVTGTTESEGLDQLLNAILDTH
GIGYGYKKIHLSGQMSAHAIAAYVNEKSGVTFFDPNFGEFHFSDKEKFRKWFTNSFWDNSMYHYPLGVGQRFRVLTFDSK
EV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAO18078.1 putative type III secreted effector LopT Not tested TTSS locus Protein 5e-78 50

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
YPTS_4265 YP_001874665.1 cysteine protease domain-containing protein VFG0375 Protein 2e-151 99