Gene Information

Name : YPTS_4216 (YPTS_4216)
Accession : YP_001874616.1
Strain :
Genome accession: NC_010635
Putative virulence/resistance : Virulence
Product : YOP protein translocation K family protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 6346 - 6972 bp
Length : 627 bp
Strand : +
Note : PFAM: YOP protein translocation K family protein; KEGG: ypa:YPA_CD0005 type III secretion protein

DNA sequence : 
ATGGAAAATTATATTACCTCTTTTCAATTGCGCTTCTGCCCCGCGGCTTATTTGCACTTGGAACAGTTACCATCATTATG
GCGTTCAATATTGCCCTACTTACCACAGTGGCGCGATAGTGCTCATCTCAATGCTGCTTTATTGGATGAATTTTCTCTTG
ATACCGACTATGAAGAGCCCCATGGGCTGGGGGCGCTGCCTTTGCAGCCTCAATCACAGCTCGAACTGTTACTTTGTCGC
CTTGGATTAGTTCTGCATGGGGAGGCGATTCGCCGTTGTGTACTGGCCTCCCCATTACAACAATTATTGACATTGGTTAA
TCAAGAAACATTAAGGCAAATTATTGTACAGCATGAGCTGCTAATCGGGCCTTGGCCCACTCACTGGCAGCGCCCGCTGC
CGACAGAAATAGAGAGCCGTACCATGATCCAGTCGGGGCTGGCTTTTTGGTTAGCAGCAATGGAACCCCAACCTCAGGCA
TGGTGTAAACGGCTCAGTTTACGCCTCCCATTAGCTACGCCGTCAGAACCTTGGTTAGTGGCCGAGTCACAACGCCCACT
GGCCCAAACTTTATGTCACAAACTTGTCAAACAGGTTACGCCTACATGCAGCCATTTGTTCAAATAA

Protein sequence : 
MENYITSFQLRFCPAAYLHLEQLPSLWRSILPYLPQWRDSAHLNAALLDEFSLDTDYEEPHGLGALPLQPQSQLELLLCR
LGLVLHGEAIRRCVLASPLQQLLTLVNQETLRQIIVQHELLIGPWPTHWQRPLPTEIESRTMIQSGLAFWLAAMEPQPQA
WCKRLSLRLPLATPSEPWLVAESQRPLAQTLCHKLVKQVTPTCSHLFK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
lscK AAO18026.1 LscK Virulence TTSS locus Protein 6e-40 50

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
YPTS_4216 YP_001874616.1 YOP protein translocation K family protein VFG0410 Protein 3e-82 100
YPTS_4216 YP_001874616.1 YOP protein translocation K family protein VFG0219 Protein 2e-23 41