|
Name : araD (YPTS_0839) Accession : YP_001871280.1 Strain : Yersinia pseudotuberculosis PB1/+ Genome accession: NC_010634 Putative virulence/resistance : Unknown Product : L-ribulose-5-phosphate 4-epimerase Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG0235 EC number : 5.1.3.4 Position : 945667 - 946362 bp Length : 696 bp Strand : + Note : catalyzes the isomerization of L-ribulose 5-phosphate to D-xylulose 5-phosphate in the anaerobic catabolism of L-ascorbate; links the arabinose metabolic pathway to the pentose phosphate pathway and allows the bacteria to use arabinose as an energy source DNA sequence : ATGTTAGAACAGTTAAAACAACAGGTCTTTGAGGCTAACTTGGCACTCCCCAAATATAAGTTGGTGACATTCACGTGGGG GAATGTCAGCGGCATTGATCGCGAACATGGATTGGTGGTGATTAAGCCCTCTGGCGTTGAATATGATGTCATGAGCGTCA ATGACATGGTGGTGGTCGATTTAGCAACCGGCAAGGTCGTGGAAGGGGATAAAAAACCCTCGTCGGATACGGATACCCAT CTGGTGTTATATCGAGCTTTCGCTGAGATTGGCGGCATTGTTCATACGCACTCACGTCATGCCACGATTTGGGCGCAGGC GGGCAAATCATTATCTGCATTGGGAACCACCCACGCGGACTATTTTTACGGGCCGATCCCTTGCACCCGCTTGATGACCG AGGCAGAAATTACCGGTGATTATGAGCATGAGACCGGTAAGGTGATTGTGGAGACTTTCGCTGAACAGGGGCTGCGAGCG GCAGACATTCCGGCCGTCTTGGTCAATGGTCACGGCCCCTTCGCGTGGGGGAGCAATGCGGCTAATGCAGTACACAATGC CGTGGTGTTAGAAGAGATAGCCTATATGAATCTGTTTACTCATCAGCTAACGCCCGGCGTAGGAGATATGCAGCAGACGT TGTTGGATAAGCATTATTTGCGTAAGCATGGGGCTGCGGCGTATTACGGCCAATAA Protein sequence : MLEQLKQQVFEANLALPKYKLVTFTWGNVSGIDREHGLVVIKPSGVEYDVMSVNDMVVVDLATGKVVEGDKKPSSDTDTH LVLYRAFAEIGGIVHTHSRHATIWAQAGKSLSALGTTHADYFYGPIPCTRLMTEAEITGDYEHETGKVIVETFAEQGLRA ADIPAVLVNGHGPFAWGSNAANAVHNAVVLEEIAYMNLFTHQLTPGVGDMQQTLLDKHYLRKHGAAAYYGQ |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| araD | YP_281517.1 | L-ribulose-5-phosphate 4-epimerase | Not tested | Not named | Protein | 3e-54 | 56 |
