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Name : YPTS_4111 (YPTS_4111) Accession : YP_001874514.1 Strain : Yersinia pseudotuberculosis PB1/+ Genome accession: NC_010634 Putative virulence/resistance : Virulence Product : Pili assembly chaperone, N-terminal Function : - COG functional category : N : Cell motility COG ID : COG3121 EC number : - Position : 4593295 - 4594062 bp Length : 768 bp Strand : - Note : PFAM: Pili assembly chaperone, N-terminal; Pili assembly chaperone, C-terminal; KEGG: ypp:YPDSF_3783 fimbrial chaperone DNA sequence : ATGAAAGACATAAATAGCATGATATGGAGACAACAACGTTTGTGGGCAAAGACAGCGCTATTCGGGATAGCCTTGTGGCT CACTGCGCTAACCAGCCAGGCGGCAATTAACCTGGATCGGACACGTATTATCTTTAATAGTACTGATAAATCAGCCAGTG TTATTTTGCAAAACCAGAGCCCGTCATCACCTTATTTGGCGCAATCTTGGTTGGAAAATACCAAAGGCCAAAAAATAGAG AGTCCATTGGTGGCTTTACCCCCTATGCAGCGGATTGATGCCGGGCAAAAAAGCCAGGTTCGGATCATGAAACTACCGGA TGCCGATAAATTACCCACTGATCGCGAGACATTATTCTATTTCAATGTGCGGGAAATCCCACCGCAAAGCGAAATGAATA ATGTCGTACAAATTGCGATTCAAAATCGGATAAAGCTGTTTTATCGGCCCATGGCTATCAAAGCGAATTATAGCGATATC TGGCAAGAGAAATTACAGATCAGTAAACTAGTGGGGGGGCTTAAAATTAATAACCCTACACCTTATTACATTACGTTGGC TTATTTGAGTCAGAATGAACAAGGTAACTTTCCTGGTTTTGACAGCGTCATGATTGCGCCTTTTGGTACTGAGTTTGTTA AAACGCCGGGTTATAGCGGTAGCCGTTATAACGTTGGTTATATGGATGATTTTGGGGGCATTGTGATACGCACTTTTAAC TGTTTATCAGCAGAATGCCAAATTCAGCCAGCTGAAAAGAGAAGGTGA Protein sequence : MKDINSMIWRQQRLWAKTALFGIALWLTALTSQAAINLDRTRIIFNSTDKSASVILQNQSPSSPYLAQSWLENTKGQKIE SPLVALPPMQRIDAGQKSQVRIMKLPDADKLPTDRETLFYFNVREIPPQSEMNNVVQIAIQNRIKLFYRPMAIKANYSDI WQEKLQISKLVGGLKINNPTPYYITLAYLSQNEQGNFPGFDSVMIAPFGTEFVKTPGYSGSRYNVGYMDDFGGIVIRTFN CLSAECQIQPAEKRR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| papD | NP_755464.1 | PapD protein | Virulence | PAI I CFT073 | Protein | 2e-43 | 48 |
| pixD | CAE85158.1 | PixD protein | Not tested | PAI V 536 | Protein | 2e-50 | 46 |
| prfD | CAD42028.1 | PrfD protein | Virulence | PAI II 536 | Protein | 5e-51 | 44 |
| papD | AAZ04423.1 | P pilus chaperone | Virulence | PAI I APEC-O1 | Protein | 6e-52 | 43 |
| papD | AAL67413.1 | PapD | Virulence | PAI II CFT073 | Protein | 5e-52 | 43 |
| papD | YP_854253.1 | pilus assembly protein chaperone PapD | Virulence | PAI I APEC-O1 | Protein | 8e-52 | 43 |
| papD_2 | NP_757033.1 | PapD protein | Virulence | PAI II CFT073 | Protein | 6e-52 | 43 |
| papD | YP_002414014.1 | Chaperone protein PapD | Not tested | Not named | Protein | 6e-52 | 43 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| YPTS_4111 | YP_001874514.1 | Pili assembly chaperone, N-terminal | VFG0885 | Protein | 8e-44 | 48 |
| YPTS_4111 | YP_001874514.1 | Pili assembly chaperone, N-terminal | VFG1547 | Protein | 3e-51 | 44 |
| YPTS_4111 | YP_001874514.1 | Pili assembly chaperone, N-terminal | VFG0896 | Protein | 3e-52 | 43 |
