Gene Information

Name : YPTS_4090 (YPTS_4090)
Accession : YP_001874493.1
Strain : Yersinia pseudotuberculosis PB1/+
Genome accession: NC_010634
Putative virulence/resistance : Unknown
Product : IstB ATP binding domain-containing protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG1484
EC number : -
Position : 4568143 - 4568472 bp
Length : 330 bp
Strand : -
Note : PFAM: IstB domain protein ATP-binding protein; KEGG: yps:YPTB3872 putative IS100 transposase

DNA sequence :
ATGGTACAGCCTTCCTTTTTTACAGACATACTCAGTTATCTGCCAATGACCAGAGAGGAAGCCAGCCTGTTCTTCCGGCT
ACTGAACCGTCGGTATGAAAAAGCGAGCATCATCCTGACGTCAAATAAAGGCTTCGCAGACTGGGGAGAGATGTTCGGAG
ATAACGTGTTGGCAACGGCGATCCTGGATCGGCTGCTGCATCACTCAACCACGCTGAATATCAAAGGAGAAAGCTACCGG
TTAAAGGAGAAACGCAAATCTGGAGTGCTGGCCAAAAACGCAACGCCAATCAGTGACGATGAAATGGCGGAAAGCGGACA
GCATCAGTAA

Protein sequence :
MVQPSFFTDILSYLPMTREEASLFFRLLNRRYEKASIILTSNKGFADWGEMFGDNVLATAILDRLLHHSTTLNIKGESYR
LKEKRKSGVLAKNATPISDDEMAESGQHQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAG37052.1 unknown Not tested espC PAI Protein 2e-17 49

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
YPTS_4090 YP_001874493.1 IstB ATP binding domain-containing protein VFG0781 Protein 9e-18 49