Gene Information

Name : YPTS_4083 (YPTS_4083)
Accession : YP_001874486.1
Strain : Yersinia pseudotuberculosis PB1/+
Genome accession: NC_010634
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4563457 - 4564314 bp
Length : 858 bp
Strand : -
Note : KEGG: yps:YPTB3865 hypothetical protein

DNA sequence :
ATGATGCAAACTGAACCCGAAGTAATGGTTGATCATAGCGAGGTGATTTGTTCGACCAGCGTAGCGCGAATCGTTGCTGG
TCGCGATAGTGCTCTGATACGGATAGAGCAGCTAATCCATCAGCTCAGTAACATTTCTTCACTTACGTCTTCAATTGGTG
GGGGGACTGCTGGCGAGTGGGCGATGAGACAGGGAAGCCGCTATGACTGCTGGTTAATGGAAGTACCAGATAAAGCTATG
GAGTTGATCACCCGAAATATCGATCGCAGTATTTGGCGTGATCTGATGGTGAAATCTGGCATGCTAGCTCTCATGGATGC
TGAAGCTCGCGAGCAGTGGTATAAAAATTTGGAAGAGGGCGACCTACCAGCTATCAATGAAGACAATATCTTCAGCACTT
TTGAACAGCTACATCTGAATAAACAGGATGTATTTGAGCGCGGTGTTATCAATGTTTTCAGGGGATTATCATGGAAATAT
AAAACAAATAATCCCTGTATGTTCGGCAAAAAAATCATTGTTAACAATCTGGTCACGCATAACCGTTGGGGGTTCAGCTT
AAGTTGGGGCTGGCGGCGGGACCAGTTAGTTGATTTGGAGCGAATGTTGTATCTGTTGGATGGTAAGCCCGTTCCTGACA
ATCGTGGGGATATCTCTGTGCGGTTAATGGAGTATATCCGAGATAACCCTCGTCAACAGAGTTACGAGGATGAGCTGTTT
GGTATCCGCTATTTTCAAAAAGGTACTGCGCATGTAATTTTCAAACGCTTGGATCTGGTGGAGAAAATGAACGATATCGT
GGCGAAGCACTATCCAGGGATGTTAGCTCGAGAAGAGTGTGCCCTCTATTCATTTTGA

Protein sequence :
MMQTEPEVMVDHSEVICSTSVARIVAGRDSALIRIEQLIHQLSNISSLTSSIGGGTAGEWAMRQGSRYDCWLMEVPDKAM
ELITRNIDRSIWRDLMVKSGMLALMDAEAREQWYKNLEEGDLPAINEDNIFSTFEQLHLNKQDVFERGVINVFRGLSWKY
KTNNPCMFGKKIIVNNLVTHNRWGFSLSWGWRRDQLVDLERMLYLLDGKPVPDNRGDISVRLMEYIRDNPRQQSYEDELF
GIRYFQKGTAHVIFKRLDLVEKMNDIVAKHYPGMLAREECALYSF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
z1226 CAD33792.1 Z1226 protein Not tested PAI I 536 Protein 2e-78 62
Z1226 NP_286760.1 hypothetical protein Not tested TAI Protein 2e-79 62
Z1664 NP_287166.1 hypothetical protein Not tested TAI Protein 2e-79 62
unnamed AAL57572.1 unknown Not tested LEE Protein 2e-77 61
unnamed CAI43906.1 hypothetical protein Not tested LEE Protein 2e-77 61
unnamed CAE85207.1 hypothetical protein Not tested PAI V 536 Protein 4e-79 60
APECO1_3484 YP_854327.1 hypothetical protein Not tested PAI I APEC-O1 Protein 3e-76 60
ORF_49 AAZ04463.1 hypothetical protein Not tested PAI I APEC-O1 Protein 2e-76 60
ECO103_3595 YP_003223452.1 hypothetical protein Not tested LEE Protein 6e-77 59
ECO111_3781 YP_003236116.1 hypothetical protein Not tested LEE Protein 8e-78 59
unnamed AAK00485.1 unknown Not tested SHI-1 Protein 2e-77 58
S3207 NP_838489.1 hypothetical protein Not tested SHI-1 Protein 3e-77 58
SF3002 NP_708776.1 hypothetical protein Not tested SHI-1 Protein 3e-77 58
aec79 AAW51762.1 Aec79 Not tested AGI-3 Protein 1e-77 58
unnamed CAD66210.1 hypothetical protein Not tested PAI III 536 Protein 8e-68 56

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
YPTS_4083 YP_001874486.1 hypothetical protein VFG1533 Protein 1e-78 62
YPTS_4083 YP_001874486.1 hypothetical protein VFG0666 Protein 1e-77 58
YPTS_4083 YP_001874486.1 hypothetical protein VFG1685 Protein 5e-68 56