Gene Information

Name : YPTS_4078 (YPTS_4078)
Accession : YP_001874483.1
Strain : Yersinia pseudotuberculosis PB1/+
Genome accession: NC_010634
Putative virulence/resistance : Virulence
Product : ABC transporter-like protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG4604
EC number : -
Position : 4560622 - 4561380 bp
Length : 759 bp
Strand : +
Note : PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: yps:YPTB3860 ABC iron siderophore transporter, ATP-binding subunit

DNA sequence : 
GTGATTGAAATAAATGATGTTAATAAAAAATACCAACAGACAACGGTACTCAATGAAATCAATGAGCGCATTCCCTCTGG
TGGTATTACCTCAATCATTGGGCCAAATGGTGCAGGAAAGTCTACGTTATTATCGATTATGAGCCGCCTCCTTACTGCCG
ATTCTGGAAATGTGTTGTTCAATGGGCTGGATGTGGCAAAAACCTCTGGGGATAAGCTGGCGACAATCCTTTCCGTTTTA
CGGCAAGAGAACCATTTTACCAGCCGCCTGACCGTCTCTGATTTGGTAGGTTTTGGCCGTTATCCCTACTCACGAGGCCG
GCTCAACGAAAATGATCGCCAGCATATTGATGCTGCGATGGAGTTTCTCAACCTGATGCCCCTGAAAGATCGTTATCTTG
ATGAGCTCTCTGGTGGGCAACGGCAGCGCGCTTATGTTGCCATGGTACTTTGTCAGGATACGAGCTATATCCTGCTAGAT
GAGCCATTGAATAATTTAGACATGAAACATTGTGTCGCGATGATGAAACAATTGCGGCGGGCCGCAGATGAGCTACATAA
AACCATCATTCTGGTTATCCACGATATTAATTTTGCCTCTGCTTATTCCGACCATATTATTGCCATGAAAAATGGTGAGG
TCATTTATCGCGGAGCACCAGCAGAAATTATGCAGCCTTCGATCCTCGAAGAAATTTTTGATATAAAAATAAGCATAGAA
AAAGTACAAGGCCAGCATATCGCGGTTTATTATCGCTAA

Protein sequence : 
MIEINDVNKKYQQTTVLNEINERIPSGGITSIIGPNGAGKSTLLSIMSRLLTADSGNVLFNGLDVAKTSGDKLATILSVL
RQENHFTSRLTVSDLVGFGRYPYSRGRLNENDRQHIDAAMEFLNLMPLKDRYLDELSGGQRQRAYVAMVLCQDTSYILLD
EPLNNLDMKHCVAMMKQLRRAADELHKTIILVIHDINFASAYSDHIIAMKNGEVIYRGAPAEIMQPSILEEIFDIKISIE
KVQGQHIAVYYR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 8e-33 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
YPTS_4078 YP_001874483.1 ABC transporter-like protein BAC0164 Protein 5e-33 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
YPTS_4078 YP_001874483.1 ABC transporter-like protein VFG1042 Protein 4e-33 41