Gene Information

Name : YPTS_3820 (YPTS_3820)
Accession : YP_001874230.1
Strain : Yersinia pseudotuberculosis PB1/+
Genome accession: NC_010634
Putative virulence/resistance : Unknown
Product : type VI secretion system lysozyme-like protein
Function : -
COG functional category : S : Function unknown
COG ID : COG3518
EC number : -
Position : 4262662 - 4263102 bp
Length : 441 bp
Strand : -
Note : TIGRFAM: type VI secretion system lysozyme-related protein; PFAM: GPW/gp25 family protein; KEGG: ypi:YpsIP31758_0315 hypothetical protein

DNA sequence :
ATGGCCGCGCTTCTTAATTGGGATCGAGGGAGTTCTGCCAGTTTGTTTGACCGCATACAGGGGAAGGGCGCTAGCTCTTC
CTCCGATGGCCGTCTGCGTGAGCTATTGAATTCAATCCAAAAGCATTTGAACGAGGTCCTTAACTCTCGTCCAGGTGCTT
GTCAAAGTGCGGTCGATCTCGGGGTTATCGACCTCAATGATGCGACCGCCACCTCATCTGATTTTCGAAAAAGTATTGAG
AAAGCCATTAAGGATTGTATCGAGAACTACGAACCCCGAATTTCTGCCGTTACGGTTCAATCCTTGCTGAACCATGGCGA
CCCACTGCAACTGAGTTTCCATATTAGCGCTCGTGTTAATTTCGACGATATGGGTGATGTCGTTGAGTTCAACATTCAGT
TAGACAATAACCGCCGTTACTGCTTTAACCAGGAAACATAA

Protein sequence :
MAALLNWDRGSSASLFDRIQGKGASSSSDGRLRELLNSIQKHLNEVLNSRPGACQSAVDLGVIDLNDATATSSDFRKSIE
KAIKDCIENYEPRISAVTVQSLLNHGDPLQLSFHISARVNFDDMGDVVEFNIQLDNNRRYCFNQET

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
aec19 YP_851425.1 hypothetical protein Not tested PAI II APEC-O1 Protein 2e-27 43
aec19 AAQ96713.1 Aec19 Not tested AGI-1 Protein 1e-27 43