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Name : YPTS_3819 (YPTS_3819) Accession : YP_001874229.1 Strain : Yersinia pseudotuberculosis PB1/+ Genome accession: NC_010634 Putative virulence/resistance : Virulence Product : type VI secretion protein Function : - COG functional category : S : Function unknown COG ID : COG3519 EC number : - Position : 4260842 - 4262662 bp Length : 1821 bp Strand : - Note : TIGRFAM: type VI secretion protein, VC_A0110 family; PFAM: protein of unknown function DUF879; KEGG: ypi:YpsIP31758_0316 hypothetical protein DNA sequence : ATGTCGTTCGAAAAGTATTTCAGGGACGAGCTGGACTACCTCCGGCAATTAGGACGCGATGCCGCAATAGAACGGCCTCA TCTCGCTGCATTTTTATCTGAGCAAGGTTCTGATCCGGATGTTGAACGTTTGCTGGAAGGCTTTGCTTTTCTAACGGGCA ACCTGCGTGAAAAAATCGATGATCAATTCCCTGAATTGACTCATGGTTTACTGAATATGTTGTGGCCGAACTACTTACGG CCAATACCGAGCATGACCATCATCGAGTACACACCGGATGAAAGTGTGGTCACCGAGGCGACGCTGGTGAAACGGGGTAG CCAAGTGATGAGTATCCCCATCGCACAAAATGGTCAGCGCAGCGCGTTTATCAACAGTAATGCTCATGCCGGGCCACAAT GTACTTTTACGTTGTGCCGTGATGTGTGGTTGTTCCCCATGTCCATCCGGGAGATCTCGGCGAACAGCAGTAACGAACAA GGCATTTTGAGTGTTCACTTTGCCGCCAAAGCGGAATTGAACTTACAAGACCTGCAATTGGATAAATTGCGCTTTTATCT GGGCGAAGACAACTACACCAGCACGCAACTCTATTTCTGGATTAACCACTATTTCGAACGCGCTGAACTGGTTGTCAACG GGATAACCATCCCGATGCCTGATTTTGACTTTAACCCAGTGGGCTTTGAACGCGATGATGCCCTCTTGCCGTACCCGAAA AACGCCTATATGGGTTACCGGATCCTGCAAGAGTATTTTTGCTTCCCCGAAGGCTTTTTGTTCTTTGATGTCAATGGTGT GGTCGATTTTCCGCCGCACTTGAATGCCAGTGAATTCTCTCTGAATTTGTATTTCTCTCAGGCATTGCCGCCGGACGTGA AAGTCCGCTCCACCACACTGCGAATGAATTGCACACCTGCGGTGAACCTGTTCCAACATGACAGTGAAGCGATTGATCTT GATGGAACCCAGACGGAATATCCGCTCTGTGTCAGCTACCATAATCCGGATCACTACGACATCTTTTCAGTTGATCGGGT TGACAGTTGGCTCAGTGAAAAAGGTGCTCCTAAGGGGCGCGGCCGGGGTCATGGCAGGGTGTACACCTCGTTTGAGAGCT TCCACCATCAGATCGAACACTCGCAAGAAAAGACCGCACTTTATTACCGCCTACGTGTGAAAAATTCATTATTCCGTAAG GGATTCGAACACTACATTTCCTTTGTTCGCAGTGATGAATCGAAGCTGGTGCTTGCTGAAGAGAATGTCTCGGTCAGCCT GACGTGCACCAACCGTGAGTTGCCGCTGTCGTTGCGCGTTGGTGATATCAATCAACTCAGCACAGACAGCCCTTCATTCG CGACGTTCCGCAATATTACCCGTCCTTCCGTGCCGTTGTATCCGGTGCTGGATGGGGGCCTGCATTGGTCATTGCTCTCC AATATGTCGTTGAACTACATGTCCTTACTGGATAAGGACGCGTTGAAGCAAATTCTGCATACCTATGATTTCCCAAGCCT GCATAACCGGCAATCTGCCAGGGCATCGCAAAAGAAACTGGACGCTATCCAACGTATTGAAACACAACCGATTGACCGGT TGTTTCGTGGCTTACCTGTCAGAGGGCTACAAACCACGCTATGGCTGGAGCAAGGGGCCTTTAGCTCTGAAGGCGAGCTT TATCTCTTTAGCACGGTATTAGCTCGCTTCTTCTCACTGTATGCCAGCGTCAATGCGTTTCATCTTTTAAAAGTCATCAA TCTTGATAATCAGGAATGTTACGAATGGCCGGTACAGACAGGTCAACATGCACTGATGTAA Protein sequence : MSFEKYFRDELDYLRQLGRDAAIERPHLAAFLSEQGSDPDVERLLEGFAFLTGNLREKIDDQFPELTHGLLNMLWPNYLR PIPSMTIIEYTPDESVVTEATLVKRGSQVMSIPIAQNGQRSAFINSNAHAGPQCTFTLCRDVWLFPMSIREISANSSNEQ GILSVHFAAKAELNLQDLQLDKLRFYLGEDNYTSTQLYFWINHYFERAELVVNGITIPMPDFDFNPVGFERDDALLPYPK NAYMGYRILQEYFCFPEGFLFFDVNGVVDFPPHLNASEFSLNLYFSQALPPDVKVRSTTLRMNCTPAVNLFQHDSEAIDL DGTQTEYPLCVSYHNPDHYDIFSVDRVDSWLSEKGAPKGRGRGHGRVYTSFESFHHQIEHSQEKTALYYRLRVKNSLFRK GFEHYISFVRSDESKLVLAEENVSVSLTCTNRELPLSLRVGDINQLSTDSPSFATFRNITRPSVPLYPVLDGGLHWSLLS NMSLNYMSLLDKDALKQILHTYDFPSLHNRQSARASQKKLDAIQRIETQPIDRLFRGLPVRGLQTTLWLEQGAFSSEGEL YLFSTVLARFFSLYASVNAFHLLKVINLDNQECYEWPVQTGQHALM |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| APECO1_1761 | YP_851424.1 | hypothetical protein | Not tested | PAI II APEC-O1 | Protein | 6e-143 | 47 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| YPTS_3819 | YP_001874229.1 | type VI secretion protein | VFG2078 | Protein | 4e-153 | 50 |
