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Name : YPTS_3813 (YPTS_3813) Accession : YP_001874223.1 Strain : Yersinia pseudotuberculosis PB1/+ Genome accession: NC_010634 Putative virulence/resistance : Virulence Product : type VI secretion ATPase Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 4253073 - 4255676 bp Length : 2604 bp Strand : - Note : KEGG: ypn:YPN_3573 Clp ATPase; TIGRFAM: type VI secretion ATPase, ClpV1 family; PFAM: ATPase associated with various cellular activities AAA_5; ATPase AAA-2 domain protein; SMART: AAA ATPase DNA sequence : ATGATTCAAATTGACTTGCCCACACTCGTAAACCGCCTTAATCCCATTGCCCGCCATTCTCTGGAAGCGGCGGCGGCGCA TTGCGTCAGTCAGCAGGAAGCTGAAATTACGGTCTCCCAAGTGCTACTGCAAATGATCTCCACACCATTATGTGATGTCA GGTTAATCCTGAGCCATGCGGGTGTTGAGGAGGATGAACTACGGGAGTCGCTCGATCAACGTGTTTCAGGCTATCAAGCT ATTACCCAGGCCTACCCGAGTTTTTCCCCATTACTGGTGGAATGGTTACAAGACAGTTGGTTGCTGGCATCGACAGAGAT GGAACACAGCCAACTCCGTAGCGGCGTGATGTTATTGACGTTATTGCTCAGCCCGTCGCGCTATCTGGTTCCTACGGCCA ACCGGCTACTGTCTCCGATTAACCGTGAGTTACTGCGTCAGAATTTTGCTAACTGGACGGCAGACTCAGCAGAAACACCG CGAGCAGAAAAAGGGGCTGAAGCTGGCAACGGCGCAGAAATCAATGGTGACAGCTTGCTGGCCCGCTATGCCAGCAATAT GACCGAACAGGCCCGTAACGGGGAATTAGACCCTGTGCTGTGTCGGGATACCGAAATCGATCTGATGATCGATATTCTGT GCCGCCGCCGCAAAAATAACCCGATAGTGGTGGGTGAAGCGGGGGTAGGGAAAAGTGCGCTGATCGAAGGTTTAGCCCTG CGTATCGTGGATAATCAGGTGCCAGAAAAACTGCGTAACAGCGAGTTGATGACGCTGGATTTAGGCGCGCTTCAGGCTGG CGCGGCAGTGAAAGGCGAATTTGAGAAGCGTTTCAAGGGCATCATGGCGGAAATTGCGCAGTCCACGACGCCAATTATCC TGTTTATTGATGAAGCACACACGCTGATCGGGGCCGGTAACCAACAGGGCGGGTTAGACATTTCCAATCTGCTCAAACCC GCTTTAGCGCGTGGTGAACTGAAAACGATTGCGGCAACCACCTGGAGCGAATACAAAAAATACTTTGAAAAAGATGCTGC GCTGTCGCGCCGTTTCCAGTTGGTCAAAGTTTCTGAACCCAGCGCGCAAGAGGCCACGATTATCATGCGTGGCCTACGTA CAGTTTATGAACAGGCGCATGGCGTCCTGATCGATGATGAAGCATTGCAAGCTGCGGCGGTGCTCAGTGACCGCTATATT TCAGGGCGGCAGTTGCCAGATAAAGCCATCGACGTGTTAGATACCGCAGCCGCACGTGTTGCCATCAATCTCACCTCTGC ACCGCGTCAGGTTTCGGCACTGAAAAACGAACTCTACCATCAGGGGATGGAAATCGAGATGCTGGAGCGGGAGCAACGCC TCAGCTTAAGCCGCCCGGATGAGCGGTTATCCGTTTTACAACAGCAGCGAATTGAGATCGAACAGCAACTCATTGCCCTG AATACCGGTTGGGAAAAGCAACAACATTTGGTCCAGCAGATTATCGCACTGAGAGCGGTCCTGTTGGCACAAGAAGAGAG CGCCACAGATGAGCAAGTGGTCAATCTGACAGCGCTGAGCGATGAGTTGGAACGGTTGCAACAGCACCAGACGCTGGTCT CGCCCCATGTGGATAAGAGCCAGATTGCGGCGGTGATCGCGGAATGGACCGGTGTACCGCTAAACCGCCTTTCTCAGAGT GAATTGGCGGTGGTTACTGAATTGCCCTCTTATCTGGGGCAGCAGATCAAAGGACAAGAGACGGCTATCCATTGCTTGCA CCAACACTTGCTGACCGCAAGGGCGGATTTACGTCGCCCAGGTCGCCCAATGGGGGCTTTCCTGTTGGTTGGACCTAGCG GCGTGGGTAAAACGGAAACCGTGCTACAGATTGCCGACCTGCTCTATGGTGGCCGCCAATATCTCACCACCATCAATATG TCCGAATTCCAAGAGAAGCATACCGTCTCGCGCCTGATTGGTTCACCTCCGGGCTACGTCGGGTATGGTGAAGGCGGCGT ACTGACCGAAGCTATTCGTCAAAAACCTTACTCGGTAGTGCTACTGGATGAAGTGGAAAAAGCCCACCCCGATGTGCTAA ATCTGTTTTATCAGGCCTTCGATAAGGGCGAGTTGGCGGACGGTGAAGGCCGCATCATCGATTGCAAAAATATCGTATTT TTCCTGACCTCCAATCTGGGATACCAGACCATTGTTGATCATGCAGACGAGCCTGCATTGCTCAATGAACGGCTCTACCC CGAGCTATCGGCATTCTTTAAACCTGCGCTACTGGCCCGCATGGAAGTGGTTCCTTATCTGCCGCTGGGCATGGAAACGC TGCAAATTATCATTCACGGCAAACTGAACCGTCTGGATACGCTGCTGCGCCAACGCTTTAGTGCTGATGTGGTCATTGAA CCTGAAGTGATCGACGAAATCCTGCTACGCGCGACCCGTGCCGAAAATGGTGCGCGTATGCTCGAGTCGATTATCGACGG TGCGCTATTACCACCGGTTTCTCTGTTGTTATTACAGAAAGTGGCCGCTGGCACCGCTATCAGCCACATTCGGATCGCGG TAGAGGGGAATGTGTTTACTGCACAGGTTGAGGGAGCGATATGA Protein sequence : MIQIDLPTLVNRLNPIARHSLEAAAAHCVSQQEAEITVSQVLLQMISTPLCDVRLILSHAGVEEDELRESLDQRVSGYQA ITQAYPSFSPLLVEWLQDSWLLASTEMEHSQLRSGVMLLTLLLSPSRYLVPTANRLLSPINRELLRQNFANWTADSAETP RAEKGAEAGNGAEINGDSLLARYASNMTEQARNGELDPVLCRDTEIDLMIDILCRRRKNNPIVVGEAGVGKSALIEGLAL RIVDNQVPEKLRNSELMTLDLGALQAGAAVKGEFEKRFKGIMAEIAQSTTPIILFIDEAHTLIGAGNQQGGLDISNLLKP ALARGELKTIAATTWSEYKKYFEKDAALSRRFQLVKVSEPSAQEATIIMRGLRTVYEQAHGVLIDDEALQAAAVLSDRYI SGRQLPDKAIDVLDTAAARVAINLTSAPRQVSALKNELYHQGMEIEMLEREQRLSLSRPDERLSVLQQQRIEIEQQLIAL NTGWEKQQHLVQQIIALRAVLLAQEESATDEQVVNLTALSDELERLQQHQTLVSPHVDKSQIAAVIAEWTGVPLNRLSQS ELAVVTELPSYLGQQIKGQETAIHCLHQHLLTARADLRRPGRPMGAFLLVGPSGVGKTETVLQIADLLYGGRQYLTTINM SEFQEKHTVSRLIGSPPGYVGYGEGGVLTEAIRQKPYSVVLLDEVEKAHPDVLNLFYQAFDKGELADGEGRIIDCKNIVF FLTSNLGYQTIVDHADEPALLNERLYPELSAFFKPALLARMEVVPYLPLGMETLQIIIHGKLNRLDTLLRQRFSADVVIE PEVIDEILLRATRAENGARMLESIIDGALLPPVSLLLLQKVAAGTAISHIRIAVEGNVFTAQVEGAI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| aec27 | YP_851418.1 | ATPase | Not tested | PAI II APEC-O1 | Protein | 0.0 | 69 |
| aec27 | AAQ96721.1 | Aec27 | Not tested | AGI-1 | Protein | 0.0 | 69 |
| STY0294 | NP_454876.1 | ClpB-like protein | Not tested | SPI-6 | Protein | 2e-127 | 47 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| YPTS_3813 | YP_001874223.1 | type VI secretion ATPase | VFG2084 | Protein | 0.0 | 63 |
