Gene Information

Name : YPTS_3707 (YPTS_3707)
Accession : YP_001874117.1
Strain : Yersinia pseudotuberculosis PB1/+
Genome accession: NC_010634
Putative virulence/resistance : Virulence
Product : D-arabinose 5-phosphate isomerase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG0794
EC number : 5.3.1.13
Position : 4129698 - 4130771 bp
Length : 1074 bp
Strand : +
Note : TIGRFAM: KpsF/GutQ family protein; PFAM: CBS domain containing protein; sugar isomerase (SIS); KEGG: ypp:YPDSF_0320 hypothetical protein

DNA sequence :
ATGCTCAGGAAGGCTTGGAGCGAAAGCAACCAACACACCTACAGCGTGAAAGATGACGGTAATACCAACATTGGGCGGAT
ATTAAGTATGTCTACTTTTGATTTACAGCCGGGCGTGGATTTCCAGCAGGCAGGTAAGCAGGTACTTCAGATTGAACGCG
AAGGGCTGGCTCAACTCGATCAATACATAAACGAGGATTTCTCCAGAGCCTGTGAGGCCATTTTTCGTTGCCACGGCAAA
GTCGTCGTGATGGGAATGGGCAAATCTGGTCATATTGGCTGCAAAATTGCAGCCACATTCGCCAGCACGGGCACACCTGC
ATTTTTTGTCCATCCTGGTGAAGCCAGCCATGGCGATTTGGGCATGATCACGCCACAAGATATTGTATTAGCTATCTCTA
ACTCTGGGGAATCCAACGAAATCCTCACGTTGATCCCCGTGCTTAAGCGCCAGAAAATTCTGTTGATTTGCATGAGCAGT
AACCCTGAGAGCACCATGGGTAAAGCGGCCGATATTCACTTGTGCATTAATGTGCCACAAGAGGCCTGTCCGCTGGGGCT
AGCGCCAACCACCAGTACGACTGCAACACTGGTTATGGGGGATGCGTTGGCGGTAGCCTTGCTCAAAGCACGGGGTTTCA
CGCAGGAAGATTTCGCACTCTCTCACCCAGGTGGCGCGCTGGGGCGTAAGTTGCTGCTGCGGATCAGCGATATTATGCAT
ACGGGTACGGAGATCCCCACCGTCAGCCCTGATGCATCATTACGTGATGCCTTGCTAGAAATTACTCGGAAAAGTCTGGG
TTTGACCGTTATTTGTGACGATTCAATGAGGATTAAAGGTATCTTTACCGACGGTGACTTGCGCCGGGTATTTGATATGG
GCATTGATCTGAATAATGCAAAAATTGCTGACGTCATGACTCGCGGGGGTATTCGAGTCCCTCCGAACATATTGGCGGTG
GACGCGCTCAATCTGATGGAGTCACGCCATATCACTGCGTTGCTCGTCGCTGATGGTGACCAATTACTGGGTGTCGTACA
TATGCACGATATGCTGAGAGCCGGTGTTGTCTGA

Protein sequence :
MLRKAWSESNQHTYSVKDDGNTNIGRILSMSTFDLQPGVDFQQAGKQVLQIEREGLAQLDQYINEDFSRACEAIFRCHGK
VVVMGMGKSGHIGCKIAATFASTGTPAFFVHPGEASHGDLGMITPQDIVLAISNSGESNEILTLIPVLKRQKILLICMSS
NPESTMGKAADIHLCINVPQEACPLGLAPTTSTTATLVMGDALAVALLKARGFTQEDFALSHPGGALGRKLLLRISDIMH
TGTEIPTVSPDASLRDALLEITRKSLGLTVICDDSMRIKGIFTDGDLRRVFDMGIDLNNAKIADVMTRGGIRVPPNILAV
DALNLMESRHITALLVADGDQLLGVVHMHDMLRAGVV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
kpsF CAE85210.1 KpsF protein Virulence PAI V 536 Protein 1e-50 43
kpsF AAZ04466.1 polysialic capsule transport protein Virulence PAI I APEC-O1 Protein 3e-51 43
kpsF YP_854329.1 polysialic acid capsule synthesis protein KpsF Not tested PAI I APEC-O1 Protein 8e-51 43