Gene Information

Name : YPTS_0350 (YPTS_0350)
Accession : YP_001870796.1
Strain : Yersinia pseudotuberculosis PB1/+
Genome accession: NC_010634
Putative virulence/resistance : Virulence
Product : type III secretion system protein
Function : -
COG functional category : N : Cell motility
COG ID : COG1886
EC number : -
Position : 386112 - 387074 bp
Length : 963 bp
Strand : +
Note : TIGRFAM: type III secretion system apparatus protein YscQ/HrcQ; PFAM: surface presentation of antigens (SPOA) protein; KEGG: ypp:YPDSF_3701 type III secretion system apparatus protein

DNA sequence : 
GTGCTGACGAATCTGACGCCTGAGTTACGCGCCCTTAGCACCTTGATCGGGAGTGGCCGGCAGACAGCAGGGGTGTCGGT
GGCCTTGACGGAGATTGACGGTGAGGGCGTTTATCTGCCACTGCATTATGGCGGCCAAGAGTGTGGGTTGTGGTTATCAC
AATCCTGTTGGCAGCACTGGCTGAACACGACGTTGGCAACCGATAACCCCCAGTTGTTGGCCGCAGAGTTAGTGATCGCC
ATGGCTAATTGGGCCGTCACCCCATTGTTAGCGCCGTTTACCGATCTGGTGGTATTGGCCGAGTCACCACAGAAGAGGTC
ACTACCAAAGCAGTGGGCGGTGACGGTGGCTTTCGAGCTGGAGGGACAGCCGATTATCGGTGTGTTACAGGATTGGCCGC
AGGCGGCATTAGCCGACACCTTGTCTCATTGGCCGCACGAAGCGGTCACCGCTCCTGATTTGCTTTGGCAATCTGGATTG
GTGGCGGGTTGGTGCCACTTATCATTGCGTCAATTACGGCAGTTAGGGCCGGGTGAGGGTTTACGCCTCTCTATGGCGGC
GGAATTGGATAAAGAAGCGTGCTGGGTATGGCATCACGCATCGCCACAAATTTATATCAAGCTAGAGGGTGGGAACAGAA
TGACAATTCAACAGATTAATGAAGCGAGTGACCCGCTGGCCTGCGGCAGTCGCGCTGAATCACCGCCTCTGGCGGCGGTA
CAACTTGAGGATTTACCGCAAACGCTGGTGATGGAAATTGGCCGTTTGACCTTGCCTCTGGGGGAGATAAAACAACTCGC
GGTTGGTCAGACGCTGGCGTGCCAAACCCACTGTTATGGCGAGGTGAATATCTGCCTGAATGGGCAATCCGTTGGCCGTG
GCAGTTTACTCCGGTGCGATGAAAAACTGGTGGTCAGAATTGCACAATGGGGATTACAAAACGGCGAAAATATCATGGAA
TGA

Protein sequence : 
MLTNLTPELRALSTLIGSGRQTAGVSVALTEIDGEGVYLPLHYGGQECGLWLSQSCWQHWLNTTLATDNPQLLAAELVIA
MANWAVTPLLAPFTDLVVLAESPQKRSLPKQWAVTVAFELEGQPIIGVLQDWPQAALADTLSHWPHEAVTAPDLLWQSGL
VAGWCHLSLRQLRQLGPGEGLRLSMAAELDKEACWVWHHASPQIYIKLEGGNRMTIQQINEASDPLACGSRAESPPLAAV
QLEDLPQTLVMEIGRLTLPLGEIKQLAVGQTLACQTHCYGEVNICLNGQSVGRGSLLRCDEKLVVRIAQWGLQNGENIME

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
YPO0269 YP_002345351.1 type III secretion system protein Virulence Not named Protein 2e-133 99