Gene Information

Name : YPTS_0334 (YPTS_0334)
Accession : YP_001870780.1
Strain : Yersinia pseudotuberculosis PB1/+
Genome accession: NC_010634
Putative virulence/resistance : Virulence
Product : two component LuxR family transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG2197
EC number : -
Position : 371558 - 372190 bp
Length : 633 bp
Strand : -
Note : PFAM: regulatory protein LuxR; response regulator receiver; KEGG: yps:YPTB0310 putative two-component response regulator

DNA sequence : 
ATGAATACTAAATTATTGATTGTCGACGATCATGAACTCATTATTCATGGCATCAAGAATATGCTGGCCGCCTATCCGCG
CTACCTGATTGTAGGCCAAGCAGATAATGGACTTGAAGTGTATAACTTGTGCCGCCAAACTGAACCTGACATGGTCATTC
TGGATTTAGGATTACCCGGTATGGATGGCCTTGATGTTATCATTCAGTTGCTTCGCCGTTGGCCAGCGATGAAGATCCTG
ACGTTAACCGCCCGCAATGAAGAACACTATGCCAGCAGAACATTCAACAGTGGAGCCTTAGGTTATGTGCTGAAGAAAAG
TCCCCAGCAAATCCTGATGGCAGCCATTCAAACCGTCGCAATAGGTAAACGTTATATTGACCCCGCCCTTGATGCCTCTA
TGGTAATAAAACTGACTCAAGGACCCGCTAATACTCCTACGGTTCTGACACCCCGCGAGCGGCAGATATTAAAACTTATC
ACCGAGGGATCGTGTAATCGGGTTATTGCTGCTCAACTTTCTATCAGCCAAAAAACCGTCGAAACACATCGGCTGAATAT
GATGAAAAAACTGGATGTACATAAAGTCGCAGAACTTATTCACTGGTCATACCGATTAGGCTTGAATGTCTAA

Protein sequence : 
MNTKLLIVDDHELIIHGIKNMLAAYPRYLIVGQADNGLEVYNLCRQTEPDMVILDLGLPGMDGLDVIIQLLRRWPAMKIL
TLTARNEEHYASRTFNSGALGYVLKKSPQQILMAAIQTVAIGKRYIDPALDASMVIKLTQGPANTPTVLTPRERQILKLI
TEGSCNRVIAAQLSISQKTVETHRLNMMKKLDVHKVAELIHWSYRLGLNV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
YPO0255 YP_002345335.1 two-component response regulator Not tested Not named Protein 1e-87 99
ssrB YP_216399.1 secretion system transcriptonal activator Virulence SPI-2 Protein 3e-41 56
ssrB NP_456137.1 putative two-component response regulator Virulence SPI-2 Protein 2e-41 56
ssrB NP_805062.1 two-component response regulator Virulence SPI-2 Protein 2e-41 56
ssrB NP_460356.1 transcriptional activator Virulence SPI-2 Protein 2e-41 56
ssrB CAB09344.1 SsrB Virulence SPI-2 Protein 6e-36 56

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
YPTS_0334 YP_001870780.1 two component LuxR family transcriptional regulator VFG0492 Protein 7e-42 56