|
Name : YPTS_3421 (YPTS_3421) Accession : YP_001873831.1 Strain : Yersinia pseudotuberculosis PB1/+ Genome accession: NC_010634 Putative virulence/resistance : Unknown Product : ImpA family type VI secretion-associated protein Function : - COG functional category : S : Function unknown COG ID : COG3501 EC number : - Position : 3785608 - 3787833 bp Length : 2226 bp Strand : - Note : TIGRFAM: type VI secretion system Vgr family protein; PFAM: Rhs element Vgr protein; KEGG: yps:YPTB3284 hypothetical protein DNA sequence : ATGTTTGCTGACAGTAATAAAGCCAAAGTAAAAGAACGTAGTGCCGTTAACTCGGCTTCAACGGGGACAGCCGCTATTTC TGCAGCAATTAACGCACCTTCCGGGCTACAATTTACGCTGACCGCTGCCGGTTTACCGCCTCAGACATTTGCCGTCGTCG ATTTTTCATTAAACGAGGCGTTCTCCTCACCTTTTGTTTTACATGTTGGCTTGGCCAGTGCCGATCCTGCGGTGGATTTT TCTGCGGTATTGGATGAAGACGCGACGTTGTCTATCTGGCGCGAAGGTATTTTACAGCGCAGTATTACTGGCATGATTGC CAGCTTTGAACAGGGCAATACCGGGTTTCACCAGACCCGCTACAGTATGGTGATCCGCCCCGCGCTGTGGCGTACTTCTT TGCGCCGCAACTCACGAATTTTCCAGTTGGAATCGGTTGAGGCCATCATTTCTACGCTGTTGAAAGAGAATGGCATTAAT GATTTTGCCTTCGGTTTCCGTCATTCACATCCAGCACGTGAGTTCTGCGTGCAATATCAAGAGTCGGATTTTGATTTTAT CCAGCGCCTGACAGCAGAAGAGGGCATTTTCTACTACTTCGAATTCAGCACGGGCAAAAACACCGTGGTCTATGCCGATG ATGTTGGCTCCCTGCCGAAGGGGGCGTCACTGCCGTATAACCCGAATGTGGCGGCACAGGCGCAGGAACTGAGCATCACC ACCTTTACCCGCAGCGCGCAAGTACGCCCGGCGATGGTACAGCTAAAAGACTACACCTTCAAAAATCCCAAATGGGCGGC TGAGTTCAGTGAACAAGCGCGCGAGTTACAGAATCAGAGGCCGGATTACGAGCATTTTGACTTCCCTGGGCGTTTCAAAG ATGAGCAACATGGCAAGGATTTTACCCGTTACCGGTTGGAGGCACTGCGCAACGATGCGAATAAGGGGCAGGGGGAAAGT AACGAATTTACCTTGCAGCCGGGGCAACTCTTTAGCCTGAGTGCCCACCCGCGTGACGATTTAAATCATGCCTGGCAGAT CGTCAGCATTCAGCATACCGGTAAACAGATGCAGGCACTGGAGCAAGAGTCTGGCGATCAGGGCACCGTATTGTTTAACC AGTTCAGCTTTATTCCACCGACGCAAACCTGGCGGCCAACGCCGCTGCCAAAACCAGTCACTGATGGCCCACAGATCGCG ATGGTCGTGGGGCCACCGAGCGAAGAAATTTACTGCGACGAGTATGGCCGCATCCGGCTGCAATTCCAGTGGGACCGCTA TGGTCAAAGTAACGATCAAAGTTCATGTTGGATCCGCGTTACCCAGCCGTGGGCTGGCCAAGGCTGGGGCATGTTGGCGA TCCCGCGTATCGGCCAGGAAGTGGTGGTAGATTTTCTGCACGGTGACCCGGACCAACCGATTGTCACCGGGCGCACTTAT CATGCTAATAACCTTCCCCCTTCAGCATTGCCTGGGGCGAAAACGCAGATGGCGCTACAGTCGAAAACCCATAAAGGCGA AGGCTATAACGAATTGCGTTTTGAGGATCAAGACGGCAAGCAAGAGCTGTCGATGCGGGCACAGAGGGACATGAATACCA CGGTGTTGAATGACCGTTCGACCACGGTTTCAGGCAATCACACCGAAACGGTGACCAAAGATCAAGCGGTGACGGTTTCG GGTAATCAGACCATGGATATCACCCAAGACCAAACCATTACCGTCACTGGGACACAACGCATTGATGTGACTCAAGATCG CATCATTGACGTGACAGCAGAACAACAAACGACGGTAAAAGCAGATGATCGGTTACTGATATCTGGAAAACAGAAAACCA AGATAGATCTGGATCAGGAATATGAGGTAGTCGGCTCACAAAAAAAGACTATTGGGGCTAACCAAACACTGAAGGTGGGC GGATATCAAAAGAATACCCTCGAGGGTTATAAAAAATCCAAGATTGGCGGCGATAATACCACCACCGTTGGGGGGCACGA TAAATTAACCGTCGGTGACACAATCACGATCACCGCAGGCACCAGTATTACGCTGCAATGTGGTGCCTCCAGTATTGTTA TGGATGAAGCCGGTAATATAAAAATTACCGGGGTTAATATCACCTCTGCGGCATCGACGACACATACGATAAAAGCTAAA ACAGTGACATCCTGCGGTGATACGGAAAATATCGTGGAAGGTGGCATTCTAAAATTAAATCCTTAA Protein sequence : MFADSNKAKVKERSAVNSASTGTAAISAAINAPSGLQFTLTAAGLPPQTFAVVDFSLNEAFSSPFVLHVGLASADPAVDF SAVLDEDATLSIWREGILQRSITGMIASFEQGNTGFHQTRYSMVIRPALWRTSLRRNSRIFQLESVEAIISTLLKENGIN DFAFGFRHSHPAREFCVQYQESDFDFIQRLTAEEGIFYYFEFSTGKNTVVYADDVGSLPKGASLPYNPNVAAQAQELSIT TFTRSAQVRPAMVQLKDYTFKNPKWAAEFSEQARELQNQRPDYEHFDFPGRFKDEQHGKDFTRYRLEALRNDANKGQGES NEFTLQPGQLFSLSAHPRDDLNHAWQIVSIQHTGKQMQALEQESGDQGTVLFNQFSFIPPTQTWRPTPLPKPVTDGPQIA MVVGPPSEEIYCDEYGRIRLQFQWDRYGQSNDQSSCWIRVTQPWAGQGWGMLAIPRIGQEVVVDFLHGDPDQPIVTGRTY HANNLPPSALPGAKTQMALQSKTHKGEGYNELRFEDQDGKQELSMRAQRDMNTTVLNDRSTTVSGNHTETVTKDQAVTVS GNQTMDITQDQTITVTGTQRIDVTQDRIIDVTAEQQTTVKADDRLLISGKQKTKIDLDQEYEVVGSQKKTIGANQTLKVG GYQKNTLEGYKKSKIGGDNTTTVGGHDKLTVGDTITITAGTSITLQCGASSIVMDEAGNIKITGVNITSAASTTHTIKAK TVTSCGDTENIVEGGILKLNP |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| vgrG | AAN64196.1 | VgrG | Not tested | macrophage toxin pathogenicity island | Protein | 0.0 | 64 |
| aec15 | YP_851429.1 | hypothetical protein | Not tested | PAI II APEC-O1 | Protein | 2e-142 | 44 |
| aec15 | AAQ96709.1 | Aec15 | Not tested | AGI-1 | Protein | 2e-142 | 44 |
