Gene Information

Name : YPTS_3403 (YPTS_3403)
Accession : YP_001873815.1
Strain : Yersinia pseudotuberculosis PB1/+
Genome accession: NC_010634
Putative virulence/resistance : Virulence
Product : TonB-dependent siderophore receptor
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1629
EC number : -
Position : 3762532 - 3764712 bp
Length : 2181 bp
Strand : +
Note : TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: yps:YPTB3267 putative ferric siderophore receptor

DNA sequence : 
ATGAAACACAAACACCTCTGGGTATTAAATCCGTGTCTGCTGGTCATGCTCACACCAGCGGCGTGGGCAGAGGATCAACT
TGTGGTTTCAGCCAACCGCTCACACCGCAGCGTGGCAGAAATGGCGCAAACAACTTGGGTGATTGAAGGCCAGGAACTTG
AACAACAAGTTCAAGGCGGCCTGGAAATCAAAGACATCTTGGCTCAATTGATCCCAGGTATCGACGTCAGCAGCCAAGGC
CGTACCAACTACGGCATGAACATGCGTGGCCGCTCAATCATGGTGATGATCGACGGCGTGCGGCTGAACTCTTCACGTAG
CGACAGCCGCCAACTCGATTCGATCGATCCGTTTAATATTGCACACATTGAAGTCATCTCCGGTGCGACGTCACTTTATG
GCGGGGGTAGCACGGGGGGCTTGATCAATATCGTGACCAAAAAAGGCCAGGAAGGAAAACAGGTTGAGTTGCAAACTGGC
GGCAAAACCGGCTTTAACAGCCATAACGACCACGATGAGAACATCTCGGCCGCCATGAGTGGGGGGACTGAGCGCGCATT
CGGCCGATTCTCTGTTTCTTATCAACGTTATGGGGGGTGGTACGACGGCAAAGGCAATGAGGTTTTGATCGACAACACCC
AGACCGGCTTGCAATATTCTAACCGTCTGGACGTGATGGGCACGGGAACCCTCAATATCGACGAAAACCAGCAATTGCAG
CTAACCACTCAGTATTTCAACAGCGAATCCGATGGCAAACACGGCTTGTATCTGGGGCAAAACTTCTCAGCAGTAACGGG
TACCGGGCAGGCCTCCAACAGCGCAGCGCTAAATTCAGACCGTATTCCGGGTACCGAACGCCATCTCATCAACTTGCAAT
ACTCCAACACGGATTTCTGGGGGCAGGATTTAGTGGCGCAAGTGTATTACCGTGATGAATCACTAACCTTCTACCCATTC
CCAACACTGAAAGATGGCAAGGTGAGCACTATCGGTGCATCACAGCAAAAAACCGATTTCTACGGCAGTAAACTGACATT
GAACAGTGAACCTATCGATAGCCTAACACTGACTTACGGTATCGATTTGGAACATGAAAGTTTCAATGCCAATCAACAGT
TCTTTAATCTGGCGAAGGCACAGCAATCCGGCGGCATGACGTTAGAAAATGCCTACAACGTTGGCCGTTACCCAAGTTAT
ACCACCACCAACCTGGCTCCCTTCTTACAAACCCGCTATGACATCAACCCGATTTTCACTCTGAGCGGCGGCGTGCGTTA
CCAGTACACAGAGAACAAGGTTGATGATTTTGTGGGTTACGCACAACAACAAGCGATTGCCAGCGGCTCCGCGACTTCCG
CTGATCCCGTACCTGGTGGGAAAACGGATTACAACAACTTCCTGTTCAATGCCGGTTTACTGGCGCACCTGACAGAAAGC
CAGCAGACCTGGTTCAACTTTTCACAAGGATTTGAGATCCCGGATCTGGCGAAATATTACGGTTCTGGCTCCTACACGCT
GGTTAACGGTCACTATCAGTTGCAAAACAGTGTCAACGTGAATGACTCCAAACTGGAGGGCATCAAGGTTGATTCCTATG
AGCTGGGCTGGCGCTATACCGGTGATAACCTGCGCACCCAAATGGCGGGTTATTACTCGCTTTCTGATCAGACTATCTCG
ATCAACAAAACAGACATGACCATCAATGTGTTACCGGATAAGCGCCGAATCTATGGGGTAGAAGGCGCAGTAGATTACTT
CTTCGATAACAGCGAATGGAGTGCCGGTGCAACATTTAACCTAATTAAGTCGGAAACTAAGGTTAGCGGTAAGTGGCAGA
AACTGACTATCGATGCTGCCAGCCCGTCGAAAGCCACCGCCTACATTGGCTGGGCACCGGGTGATTGGAATCTGCGCGTG
CAATCCCAACAAACGTTCGATGTTTCCGACAGCAAGGGGGACAAAATAGACGGTTACAACACCATCGATTTTCTCAGTAG
CTACGCCCTACCCGTGGGAAAACTCAGTTTCAGTATCGAAAACTTGCTGGACAAAGAGTACACCACCGTTTGGGGTCAGC
GCGCACCGATTCTGTATAGCCCAACCTACGGCTCACCCAACTTATACAGCTATAAGGGCCGTGGCCGGACTTTTGGTGTG
AACTACTCAGTGTTGTTCTGA

Protein sequence : 
MKHKHLWVLNPCLLVMLTPAAWAEDQLVVSANRSHRSVAEMAQTTWVIEGQELEQQVQGGLEIKDILAQLIPGIDVSSQG
RTNYGMNMRGRSIMVMIDGVRLNSSRSDSRQLDSIDPFNIAHIEVISGATSLYGGGSTGGLINIVTKKGQEGKQVELQTG
GKTGFNSHNDHDENISAAMSGGTERAFGRFSVSYQRYGGWYDGKGNEVLIDNTQTGLQYSNRLDVMGTGTLNIDENQQLQ
LTTQYFNSESDGKHGLYLGQNFSAVTGTGQASNSAALNSDRIPGTERHLINLQYSNTDFWGQDLVAQVYYRDESLTFYPF
PTLKDGKVSTIGASQQKTDFYGSKLTLNSEPIDSLTLTYGIDLEHESFNANQQFFNLAKAQQSGGMTLENAYNVGRYPSY
TTTNLAPFLQTRYDINPIFTLSGGVRYQYTENKVDDFVGYAQQQAIASGSATSADPVPGGKTDYNNFLFNAGLLAHLTES
QQTWFNFSQGFEIPDLAKYYGSGSYTLVNGHYQLQNSVNVNDSKLEGIKVDSYELGWRYTGDNLRTQMAGYYSLSDQTIS
INKTDMTINVLPDKRRIYGVEGAVDYFFDNSEWSAGATFNLIKSETKVSGKWQKLTIDAASPSKATAYIGWAPGDWNLRV
QSQQTFDVSDSKGDKIDGYNTIDFLSSYALPVGKLSFSIENLLDKEYTTVWGQRAPILYSPTYGSPNLYSYKGRGRTFGV
NYSVLF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
iutA NP_839219.1 ferric siderophore receptor Virulence SHI-2 Protein 0.0 66
iutA NP_709458.2 ferric siderophore receptor Virulence SHI-2 Protein 0.0 66
iutA AAD44750.1 IutA Virulence SHI-2 Protein 0.0 66
iutA AAK71635.1 IutA Virulence SHI-3 Protein 0.0 66
iutA YP_002414042.1 Ferric aerobactin receptor Virulence Not named Protein 0.0 66

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
YPTS_3403 YP_001873815.1 TonB-dependent siderophore receptor VFG0619 Protein 0.0 66
YPTS_3403 YP_001873815.1 TonB-dependent siderophore receptor VFG1085 Protein 0.0 66
YPTS_3403 YP_001873815.1 TonB-dependent siderophore receptor VFG0936 Protein 0.0 66