Gene Information

Name : YPTS_3401 (YPTS_3401)
Accession : YP_001873813.1
Strain : Yersinia pseudotuberculosis PB1/+
Genome accession: NC_010634
Putative virulence/resistance : Virulence
Product : IucA/IucC family protein
Function : -
COG functional category : Q : Secondary metabolites biosynthesis, transport and catabolism
COG ID : COG4264
EC number : -
Position : 3759387 - 3761135 bp
Length : 1749 bp
Strand : +
Note : PFAM: IucA/IucC family protein; KEGG: yps:YPTB3265 putative siderophore biosynthesis protein IucC

DNA sequence :
ATGATCACCACCGATTACGCTAACTGGCAGCAGGTTAATCGCCACATGATCGCTAAAATCCTTAGCGAACTGGAATATGA
ACGCACTCTGCATGCTGAATTACACGGTGAAACAGGGCGCATCACCTTGCCCGGCGCGGTTTACACCTTTAACGGCAAGC
GGGGTATCTGGGGTTGGCTACATATTGATCCTGCCACGCTGCGCTGTGAGGGTGTGCCGCTCGCCGCTGACCACATGCTG
CGCCAACTGGCGCTCGTGCTGAAGATGGACGATTCGCAGGTCGCAGAGCACCTTGAAGATTTGTACGCCACACTGCGTGG
AGACATGCAATTACTCTCCGCTCGCCACGGTATGAGTGCGGAAGCGTTGATCGCCCTTAATGATGATGCCCTGCAATGCC
TGCTGGCCGGTCACCCGAAATTTATCTTCAACAAAGGCCGCCGCGGCTGGGGCTTAACCGCCCTGCAACACTATGCGCCC
GAATATCAGGGCCAATTTCGTCTGCATTGGGTCGCAGCCAAACGCGGCAGCTTTATTTGGTGCGTGGATGCCGAATACCC
GTTGGACAACTTGCTCAACAGCGCCATGGACCCCGCCGAACGCCAACGCTTTGATCGCCGCTGGCGTGAGTGCCAATTGA
ATGATGATTGGGTCCCGGTGCCTTTACATCCGTGGCAATGGCAGCAAAAAATTGCCTTGCACTTCCTGCCACAACTTGCC
GAGGGTGAACTGATCGAACTGGGTGAATTTGGCGATCACTATCTGGCGCAACAATCGTTACGCACATTAACCAATGTCAG
CCGCCGTGTGCCATTTGATATCAAACTGCCACTCACCATTTACAACACCTCTTGTTATCGTGGCATCCCAGGCAAATACA
TCAGCGCAGGCCCCGCGGCTTCGCGCTGGTTGCAGCAAGTCTTCGCACAAGACCGCACACTGCATGAAAGCAGGGCTGAG
ATCCTCGGTGAACCCGCCGCAGGTTATATGCTGCACCAGACCTACGCCACACTTGCCAAGGCGCCTTATCGCTGCCAGGA
AATGCTCGGTGTGATTTGGCGAGAGAATCCGTCCTGCTATTTGCGAGAGGGTGAACATGCCATTTTGATGGCGACGCTGA
TGGAAACCAACAATCAGGGTCATCCGCTGATCGCGGCCTATATTGCACGTTCGGGGTTAAGTGCTGAAGCCTGGCTGGAG
CAGATGTTCCGTGTGGTAGTGGTGCCGATGTACCACCTGATGTGTTGCTACGGCGTGGCGCTAATTGCCCACGGCCAGAA
CATCACTCTGGTAATGAAAGACCATGCCCCCCAGCGCATCCTATTGAAAGATTTCCAGGGCGATATGCGTCTGGTCGATA
AAGATTTTCCGCAAGCGGCCTCGCTGCCTAACGTGGTTAAAGAGGTGACTGTGCGCTTATCTGCCGACTACCTCATCCAC
GATCTGCAAACCGGCCATTTTGTCACCGTATTACGCTTTATTTCACCGTTGATGCAGGCTTGCAACCTGAGCGAATACCG
CTTCTATCAACTGCTGGCACAGGTGCTGGAGCGCTACATGGCGCAGCATCCAGATTTGGCAGACCGCTTTACCTTATTCA
ATTTATTTAAACCACAGATTATCCGTGTGGTCCTCAACCCAGTAAAACTCACCTACTCAGAGCAGGACGGCGGCAGCCGC
ATGTTGCCTGATTATTTGCAGGATCTGGATAACCCCCTTTATTTGGTCACCAAGGAGCTAGCCCAATGA

Protein sequence :
MITTDYANWQQVNRHMIAKILSELEYERTLHAELHGETGRITLPGAVYTFNGKRGIWGWLHIDPATLRCEGVPLAADHML
RQLALVLKMDDSQVAEHLEDLYATLRGDMQLLSARHGMSAEALIALNDDALQCLLAGHPKFIFNKGRRGWGLTALQHYAP
EYQGQFRLHWVAAKRGSFIWCVDAEYPLDNLLNSAMDPAERQRFDRRWRECQLNDDWVPVPLHPWQWQQKIALHFLPQLA
EGELIELGEFGDHYLAQQSLRTLTNVSRRVPFDIKLPLTIYNTSCYRGIPGKYISAGPAASRWLQQVFAQDRTLHESRAE
ILGEPAAGYMLHQTYATLAKAPYRCQEMLGVIWRENPSCYLREGEHAILMATLMETNNQGHPLIAAYIARSGLSAEAWLE
QMFRVVVVPMYHLMCCYGVALIAHGQNITLVMKDHAPQRILLKDFQGDMRLVDKDFPQAASLPNVVKEVTVRLSADYLIH
DLQTGHFVTVLRFISPLMQACNLSEYRFYQLLAQVLERYMAQHPDLADRFTLFNLFKPQIIRVVLNPVKLTYSEQDGGSR
MLPDYLQDLDNPLYLVTKELAQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
iucC NP_839221.1 siderophore biosynthesis protein Virulence SHI-2 Protein 0.0 66
iucC NP_709456.1 siderophore biosynthesis protein Virulence SHI-2 Protein 0.0 66
iucC YP_002414044.1 Aerobactin siderophore biosynthesis protein Virulence Not named Protein 0.0 66
iucC AAK71633.1 IucC Virulence SHI-3 Protein 0.0 65
iucC AAD44748.1 IucC Virulence SHI-2 Protein 0.0 65

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
YPTS_3401 YP_001873813.1 IucA/IucC family protein VFG0938 Protein 0.0 66
YPTS_3401 YP_001873813.1 IucA/IucC family protein VFG0617 Protein 0.0 66
YPTS_3401 YP_001873813.1 IucA/IucC family protein VFG1083 Protein 0.0 65