Gene Information

Name : YPTS_3400 (YPTS_3400)
Accession : YP_001873812.1
Strain : Yersinia pseudotuberculosis PB1/+
Genome accession: NC_010634
Putative virulence/resistance : Virulence
Product : putative siderophore biosynthesis protein IucB
Function : -
COG functional category : J : Translation, ribosomal structure and biogenesis
COG ID : COG1670
EC number : -
Position : 3758440 - 3759390 bp
Length : 951 bp
Strand : +
Note : KEGG: yps:YPTB3264 putative siderophore biosynthesis protein IucB

DNA sequence : 
ATGGGGCCACACGCTAAGTTAATACACTCCGGTGGCAGTTTTTACTGTGAACATCTGGGAAAGGCGCTGCCTCTTGCTCT
CGGGCTTGACGGCAGTGCCGTACTGCACTTGCCTGGGCCGTTACCGCCAGGTTGGTTGGTGCAAGCGCTGGATCAACTGT
TCATCGCCGCACCGCAGTTGACCGGTATCGCCTTGCCGTATGCCGAGTGGCGCGATGCACCACAGGCGATGGCTCTGTTT
GCCTTGACCCGCAGCGACTATGTGGCACGGGAGATATTTTATCAGTTACCGCTGTGGCTGGGTACAGAACGCAACCGGGC
TGCGGGTCAGATGCAATATGATACCGAGCGGCATCTTTGGTATCCGCAACGCCCGCCCCGCCCAGACGGAGAAGTCTATC
GCCGCTTCGATCCCAACATCAAACGTACCCTGAGTTTCCGGTTACCAGAAGTCGATCACGATGCCCCCCAGTTCACCCGT
TGGATGAACTCACCGCGCGTGGATGCCTTTTGGGAAATGAGCGGCCCACTTGACGTGCAGGCGGCTTATCTGCAACGCCA
GTTAGATTCCCCCTATTGCTACCCGCTGCTGGGATGTTTCGATGATCAACCATTCGGTTATTTCGAAGTGTACTGGGCGG
CGGAAGACCGCATTGGCCGCCACTACCGTTGGCAACCTTTTGACCGCGGTTTGCACATGCTGGTCGGTGAAGAGAACTGG
CGCGGCGCGCAATATATACACAGTTGGTTACGTGGACTGACGCATTATCTGTATCTGGACGAATCGCGCACCACGCGCGT
AGTGGCAGAACCGCGTATTGATAACCAGCGTTTGTTCCACCACCTACCCGCCGCTGGCTACCACACCTTAAAAGAGTTTG
ATTTCCCGCATAAACGTTCGCGTCTGATTATGAATCAACGCGCCGATTTCTTCCGGGAGGGTACACGATGA

Protein sequence : 
MGPHAKLIHSGGSFYCEHLGKALPLALGLDGSAVLHLPGPLPPGWLVQALDQLFIAAPQLTGIALPYAEWRDAPQAMALF
ALTRSDYVAREIFYQLPLWLGTERNRAAGQMQYDTERHLWYPQRPPRPDGEVYRRFDPNIKRTLSFRLPEVDHDAPQFTR
WMNSPRVDAFWEMSGPLDVQAAYLQRQLDSPYCYPLLGCFDDQPFGYFEVYWAAEDRIGRHYRWQPFDRGLHMLVGEENW
RGAQYIHSWLRGLTHYLYLDESRTTRVVAEPRIDNQRLFHHLPAAGYHTLKEFDFPHKRSRLIMNQRADFFREGTR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
iucB YP_002414045.1 aerobactin siderophore biosynthesis protein, N(6)-hydroxylysine acetylase Virulence Not named Protein 2e-96 65
iucB NP_839222.1 siderophore biosynthesis protein Virulence SHI-2 Protein 3e-97 65
iucB NP_709455.1 siderophore biosynthesis protein Virulence SHI-2 Protein 3e-97 65
iucB AAD44747.1 IucB Virulence SHI-2 Protein 2e-97 65
iucB AAK71632.1 IucB Virulence SHI-3 Protein 2e-97 65

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
YPTS_3400 YP_001873812.1 putative siderophore biosynthesis protein IucB VFG1082 Protein 1e-97 65
YPTS_3400 YP_001873812.1 putative siderophore biosynthesis protein IucB VFG0939 Protein 8e-97 65
YPTS_3400 YP_001873812.1 putative siderophore biosynthesis protein IucB VFG0616 Protein 1e-97 65