Gene Information

Name : YPTS_3389 (YPTS_3389)
Accession : YP_001873801.1
Strain : Yersinia pseudotuberculosis PB1/+
Genome accession: NC_010634
Putative virulence/resistance : Unknown
Product : insertion element protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG3677
EC number : -
Position : 3747517 - 3747780 bp
Length : 264 bp
Strand : -
Note : PFAM: Insertion element protein; KEGG: ypi:YpsIP31758_0724 IS1, transposase orfA

DNA sequence : 
ATGGCTTGCATTAACGTTCATTGTCCCCGTTGTGATTCTGCTTTGGTTTATCGACATGGTCAGAACCCTAAGGGCCAAAG
CCGTTTCCGCTACCGTGAGTGCCGCTCTGTATTCCAACTGACCTACACTTATCAGGCCAGAAAGCCCAGAGTTAAAGGGC
AGATCGTTGATATGGCCTTTAACGGCGCAGGTGTGTGGGATATGGCAAGAACGCTAAAAATCGGTATCAATACCGTTATC
CGCACTTTAAAAAACTCTTGCTGA

Protein sequence : 
MACINVHCPRCDSALVYRHGQNPKGQSRFRYRECRSVFQLTYTYQARKPRVKGQIVDMAFNGAGVWDMARTLKIGINTVI
RTLKNSC

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAO21908.1 Iso-IS1 insA Not tested Not named Protein 2e-13 57
unnamed CAD66215.1 truncated InsA protein Not tested PAI III 536 Protein 1e-13 57
S4046 NP_839215.1 IS1 orfA Not tested SHI-2 Protein 2e-12 43
S4058 NP_839226.1 IS1 orfA Not tested SHI-2 Protein 2e-12 43
insA NP_709464.1 IS1 ORF1 Not tested SHI-2 Protein 4e-12 42
aec39 AAW51722.1 InsA Not tested AGI-3 Protein 4e-12 42
insA NP_458737.1 insertion element IS1 protein Not tested SPI-7 Protein 1e-11 41
InsA (Tn1) CAJ77071.1 Transposase Not tested AbaR1 Protein 7e-12 41
insA ADD91745.1 transposase Not tested PAI-I AL862 Protein 7e-12 41
insA AEZ06026.1 InsA Not tested AbaR24 Protein 7e-12 41
EC042_4086 YP_006098369.1 transposase Not tested Tn2411 Protein 1e-11 41
EC042_4114 YP_006098398.1 transposase Not tested Tn2411 Protein 1e-11 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
YPTS_3389 YP_001873801.1 insertion element protein VFG1690 Protein 5e-14 57