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Name : YPTS_3380 (YPTS_3380) Accession : YP_001873792.1 Strain : Yersinia pseudotuberculosis PB1/+ Genome accession: NC_010634 Putative virulence/resistance : Virulence Product : type VI secretion ATPase Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 3736150 - 3738798 bp Length : 2649 bp Strand : - Note : KEGG: yps:YPTB3246 Clp ATPase; TIGRFAM: type VI secretion ATPase, ClpV1 family; PFAM: AAA ATPase central domain protein; Clp domain protein; ATPase associated with various cellular activities AAA_5; ATPase AAA-2 domain protein; SMART: AAA ATPase DNA sequence : ATGACAACGCATTCAGCACACTTATTACGCCGCTTAAATCCCTATTGCGCACAGGCACTGGCCGGTGCTGCCACCCTGTG TCAGACCCGCGCCCATGCCGAGATCACTGTCGAACACTGGTTGTTAAAACTGCTGGAGCAGGGCGAAGGCGATATCACGG TGATTGCCCGGCGTTATGAGTGGGACATGGACAGCCTGTGGCAGGGATTACTGTCCCATCTGGACACCTTGCCGCGCACG GTACAGGGCAAACCTCAGTTGTCCGCCGCGTTACAGCAACTGATCAAAAGTGCCTGGCTGGATGCCTCGTTGCAGGAAAA TGCTGATGCGGTGCGCTCGGTTCATCTAATGGCAGCGCTGATAAATTCGCCATCATTATTGGCCGCCGATGCCGCCTGGC CGTTGCTCAGCCTGAGCACTACCCAACTACACCGCTTGTTGCCGTTGCTGGACAGCCAATCCGACGAACGTCCTGAGGTG CAGCAGGCTGCGGCACTGGCCGACAGCCCGGTCAATCTGGCCGATGAGGCCGCGACGGTTACCTCCGCCAGTGGTCAGCC GCAACTGAATGACGCGCTGCAAGCGGCGCTGGATAAATTTACCCTCGATGTCACCGCTAAAGCCCGTGCCAACCAGATTG ATCCGATTTTTGGCCGCGACAGCGAAATCCGCCAGATGATCGATATCCTGTCGCGCCGCCGTAAAAACAACCCGATTCTG GTCGGTGAACCGGGCGTCGGTAAAACCGCGCTGGTTGAAGGGCTGGCGCTACGTATTGCCGACGGCAACGTACCGGACAG CCTGAAAACCGTCAGTGTGCGCACACTGGATTTGGGTCTGTTACAGGCCGGGGCTGGGGTCAAAGGCGAATTCGAACAGC GCCTGAAAAATGTTATCGAGGCGGTACAACAATCCCCCAGCCCGGTGCTGCTGTTTATCGACGAAGCCCACACCATTATC GGGGCCGGTAATCAGGCCGGTGGTGCCGATGCGGCTAACCTGCTGAAACCGGCACTGGCGCGTGGCGAACTGCGCACCAT CGCCGCCACCACCTGGTCCGAATACAAACAGTATTTTGAACGCGATGCCGCACTGGAGCGCCGCTTCCAGATGGTCAAAG TGGACGAGCCGGATGATGACACCGCCTGCCTGATGCTGCGTGGCCTGAAAGAACGTTACGCCACCCATCACGGCGTGCAT ATTCTGGACGCCGCTATCACCGCAGCGGTTACCCTGTCGCGCCGCTTCCTGACCGGCCGCCAACTGCCGGACAAAGCGGT GGATCTGCTCGATACCGCCGGTGCCCGGGTGCGCATGAGCATTGACACCTTGCCGACTGCGCTGATGGCGATTAACGCCG AGCTGGCCGCACTGGCGATGGAGCAACAGGCCATCGAACAGGACTTGCTCCTGCTGCCGAATGTCAGTTCAACGCGCTTA CCTGAGATTGAGCAACGCCGCGCCGCGCTGGCGGTTGGGCAGCACACACTCGAACAGCAATATAAAGAAGAAAAACGGCT GACCACCCTGATTATCGAGGCGCGTCAGGATATCGCCAACGTGGCACATCTGGTCGCGTTGCAGGAGGAACTCGTTCAGA TCCAAGGCAACGCGCCGCTGCTGTCGCTGGACGTTGATGTGCGCACTGTTGCGGCTGTGATCGCCGACTGGACCGGTGTG CCGCTGGGCAGTTTACTCAAAGACGAACAAACCAACTTGCTGTCACTGGAAAATCGTCTGGGCGAGCGAGTAATTGGGCA GGATGCGGCATTAGGCGCGCTGGCGCAACGGCTGCGGGCGGCGAAAACCGGCCTGACATCAGAGAATGGTCCGCTGGGGG TGTTCCTGCTGGTCGGGCCGAGTGGGATCGGCAAAACCGAAACCGCGCTGGCACTGGCCGACAGCCTGTTCGGCGGCGAG AAATCGCTGATCACCATCAACTTATCGGAGTATCAGGAAGCACACACCGTCTCCCAATTGAAAGGGTCGCCACCGGGCTA TGTCGGTTACGGACAGGGCGGCGTATTGACCGAAGCGGTGCGCAAACGGCCTTACAGCGTGGTGCTGCTGGATGAAGTCG AGAAGGCCCATCGTGATGTGCTGAACCTGTTCTATCAGGTGTTTGACCGCGGTTTTATGCGCGACGGTGAAGGGCGCGAA ATTGATTTCCGCAACACGGTGATGGTGATGACCGCCAATCTGGGCAGTGATCATCTGATGCAGTTGCTCGATGAGCAACC GGACGCGCCGGACAGCACCCTGCATGAACTGCTGCGGCCAATATTGCGCGACCACTTCCAGCCCGCGCTGCTGGCCCGCT TCCAGACGCTGATCTACCGCCCACTGAATGCCCCCGCGCTGCGCACCATCGTCGAAATGAAACTGGCACAGGTCGCTAAC CGCCTCAAAAAACATTACGGCCTGCACTGCACTCTTGAAGCAAGCCTGTACGACACACTGGTCGCCGCCTGCCTGCTGCC GGACACCGGCGCACGCAACATCGACAGCCTGCTCAATCAGCAGATTTTACCGGTATTGAGCCAGCAGCTGTTAAGCCGCA TGAGCGAGCAACAGCGCACCACCTCGCTGACGCTGGGCTGGGATGAAGCCGACGGCATTACCCTTGAATTTGAAGGAGGC GAAAAATGA Protein sequence : MTTHSAHLLRRLNPYCAQALAGAATLCQTRAHAEITVEHWLLKLLEQGEGDITVIARRYEWDMDSLWQGLLSHLDTLPRT VQGKPQLSAALQQLIKSAWLDASLQENADAVRSVHLMAALINSPSLLAADAAWPLLSLSTTQLHRLLPLLDSQSDERPEV QQAAALADSPVNLADEAATVTSASGQPQLNDALQAALDKFTLDVTAKARANQIDPIFGRDSEIRQMIDILSRRRKNNPIL VGEPGVGKTALVEGLALRIADGNVPDSLKTVSVRTLDLGLLQAGAGVKGEFEQRLKNVIEAVQQSPSPVLLFIDEAHTII GAGNQAGGADAANLLKPALARGELRTIAATTWSEYKQYFERDAALERRFQMVKVDEPDDDTACLMLRGLKERYATHHGVH ILDAAITAAVTLSRRFLTGRQLPDKAVDLLDTAGARVRMSIDTLPTALMAINAELAALAMEQQAIEQDLLLLPNVSSTRL PEIEQRRAALAVGQHTLEQQYKEEKRLTTLIIEARQDIANVAHLVALQEELVQIQGNAPLLSLDVDVRTVAAVIADWTGV PLGSLLKDEQTNLLSLENRLGERVIGQDAALGALAQRLRAAKTGLTSENGPLGVFLLVGPSGIGKTETALALADSLFGGE KSLITINLSEYQEAHTVSQLKGSPPGYVGYGQGGVLTEAVRKRPYSVVLLDEVEKAHRDVLNLFYQVFDRGFMRDGEGRE IDFRNTVMVMTANLGSDHLMQLLDEQPDAPDSTLHELLRPILRDHFQPALLARFQTLIYRPLNAPALRTIVEMKLAQVAN RLKKHYGLHCTLEASLYDTLVAACLLPDTGARNIDSLLNQQILPVLSQQLLSRMSEQQRTTSLTLGWDEADGITLEFEGG EK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| STY0294 | NP_454876.1 | ClpB-like protein | Not tested | SPI-6 | Protein | 8e-136 | 43 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| YPTS_3380 | YP_001873792.1 | type VI secretion ATPase | VFG2084 | Protein | 8e-134 | 43 |
| YPTS_3380 | YP_001873792.1 | type VI secretion ATPase | VFG2076 | Protein | 5e-148 | 43 |
