|
Name : YPTS_0311 (YPTS_0311) Accession : YP_001870759.1 Strain : Yersinia pseudotuberculosis PB1/+ Genome accession: NC_010634 Putative virulence/resistance : Unknown Product : thiamine biosynthesis protein ThiC Function : - COG functional category : H : Coenzyme transport and metabolism COG ID : COG0422 EC number : - Position : 342759 - 344804 bp Length : 2046 bp Strand : - Note : required for the synthesis of the hydromethylpyrimidine moiety of thiamine DNA sequence : ATGTCTAATAATACAACGTCATTACCCGCTGAAAATTCGTCACACCCACGTAAAGGCACACCTATTCGTAAAAAGCAGCG CGAAGAGGCCCAACAGTTTATTAATACCTTACAAGGCGTTACTTTCCCCAACTCCCAACGTATTTATCTACAAGGCTCTC GGCCCGATATTCAAGTGCCGATGCGTGAAATCCAACTCAGCCCGACGCAAATCGGCGGCAGTAAAAACGAACCACGCTAT GAAGATAATGAGGCCATCCCGGTCTATGACACCTCCGGTCCCTATGGTGACCCACAAGCTAAACTGGATGTTCACAACGG GCTGCCTAAACTGCGTGCCGCTTGGGTCGCTGATCGCCAAGATACTGAAGCGCTGGCATCTGTCAGTTCCGGCTTTACCC AACAGCGTTTGGCTGATGAAGGCCTGGACCATTTACGTTTTGAGCATCTACCCCGCCCACGGAAAGCAGCCACTGGTCAA TGTGTGACTCAGTTGCATTACGCCCGACAGGGGAAAATCACGCCAGAGATGGAGTTTATCGCCCTACGGGAAAATATGGG CCGTGAACGTATTCGGGGTGAAGTCTTGCTTCAACAACATCCGGGACAAGCGTTTGGTGCCCATCTGCCGGAAAATATCA CCGCCGAGTTTGTGCGTCAGGAAGTGGCGGCCGGCCGAGCCATCATCCCCGCCAATATTAATCACCCAGAATCTGAACCA ATGATTATTGGCCGTAATTTTCTGGTCAAAGTGAATGCCAACATCGGTAATTCCGCCGTGACCTCTTCCATTGAAGAAGA GGTAGAAAAACTGGTCTGGTCTACCCGCTGGGGGGCCGATACGGTGATGGACTTATCTACGGGCCGCTATATTCATGAAA CGCGGGAATGGATCCTACGTAACAGCCCGGTCCCTATTGGCACGGTACCTATCTATCAGGCGCTGGAAAAAGTTAATGGC GTGGCCGAAAACCTGACCTGGGAAATGTTCCGTGACACCCTGTTAGAGCAGGCAGAGCAAGGGGTAGACTATTTTACTCT CCACGCGGGGGTCTTGTTGCGCTATGTGCCGATGACTGCCAAACGCCTAACCGGTATCGTCTCTCGCGGCGGTTCAATTA TGGCAAAATGGTGCCTTTCGCATCATCAGGAAAACTTCCTGTATCAGCATTTCCGCGAAATCTGTCAGATTTGTGCAGCC TATGACGTTTCATTATCACTGGGCGATGGCCTGCGCCCTGGCTCTATTCAAGATGCCAATGATGAGGCCCAATTCGCCGA ACTGCATACCTTGGGTGAATTGACCAAAATCGCCTGGGAGTATGATGTACAGGTGATGATCGAAGGCCCAGGGCATGTGC CGATGCAGATGATCCGCCGCAATATGACCGAGGAACTGGAACACTGCCACGAAGCGCCATTTTATACCTTAGGCCCACTG ACCACGGACATCGCACCGGGCTATGACCACTTTACCTCAGGGATTGGTGCAGCGATGATCGGCTGGTTCGGTTGCGCCAT GCTCTGTTATGTCACCCCCAAAGAGCACCTTGGTCTGCCGAATAAAGAGGATGTCAAACAGGGGCTTATTACTTACAAAA TTGCCGCGCACGCCGCAGATTTGGCTAAAGGCCACCCCGGTGCGCAAATTCGTGATAACGCCATGTCCAAAGCTCGCTTT GAGTTCCGCTGGGAAGATCAATTCAATTTGGCGCTTGATCCAGCAACAGCCCGCGCTTACCACGATGAAACCTTGCCGCA AGAGTCCGGGAAAGTCGCTCATTTTTGTTCCATGTGCGGCCCGAAATTCTGTTCAATGAAAATCTCACAAGAGGTCCGCG ATTATGCTGCGGCACAAGAACAAGCGGCCGCACAAGCACAAGCTGCTACACCAACCACCGCAGCACAACCAATAGACATC ACGCAGCCAATTAATATGCTGCAATCAGGGATGGAAAAAATGTCAGCCGAGTTTCGCTCCCGTGGCAGTGAGCTATACCA CCGCCCGGCGAATCTGAGTGCGGAGGCCAATAATGAGCCAACTTGA Protein sequence : MSNNTTSLPAENSSHPRKGTPIRKKQREEAQQFINTLQGVTFPNSQRIYLQGSRPDIQVPMREIQLSPTQIGGSKNEPRY EDNEAIPVYDTSGPYGDPQAKLDVHNGLPKLRAAWVADRQDTEALASVSSGFTQQRLADEGLDHLRFEHLPRPRKAATGQ CVTQLHYARQGKITPEMEFIALRENMGRERIRGEVLLQQHPGQAFGAHLPENITAEFVRQEVAAGRAIIPANINHPESEP MIIGRNFLVKVNANIGNSAVTSSIEEEVEKLVWSTRWGADTVMDLSTGRYIHETREWILRNSPVPIGTVPIYQALEKVNG VAENLTWEMFRDTLLEQAEQGVDYFTLHAGVLLRYVPMTAKRLTGIVSRGGSIMAKWCLSHHQENFLYQHFREICQICAA YDVSLSLGDGLRPGSIQDANDEAQFAELHTLGELTKIAWEYDVQVMIEGPGHVPMQMIRRNMTEELEHCHEAPFYTLGPL TTDIAPGYDHFTSGIGAAMIGWFGCAMLCYVTPKEHLGLPNKEDVKQGLITYKIAAHAADLAKGHPGAQIRDNAMSKARF EFRWEDQFNLALDPATARAYHDETLPQESGKVAHFCSMCGPKFCSMKISQEVRDYAAAQEQAAAQAQAATPTTAAQPIDI TQPINMLQSGMEKMSAEFRSRGSELYHRPANLSAEANNEPT |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| thiC | YP_001598318.1 | thiamine biosynthesis protein ThiC | Not tested | MDA | Protein | 0.0 | 72 |
| BJAB07104_00317 | YP_008207782.1 | Thiamine biosynthesis protein ThiC | Not tested | AbaR25 | Protein | 0.0 | 67 |
| BJAB0868_00321 | YP_008211647.1 | Thiamine biosynthesis protein ThiC | Not tested | AbaR26 | Protein | 0.0 | 67 |
