Gene Information

Name : YPTS_2763 (YPTS_2763)
Accession : YP_001873180.1
Strain : Yersinia pseudotuberculosis PB1/+
Genome accession: NC_010634
Putative virulence/resistance : Virulence
Product : type VI secretion protein
Function : -
COG functional category : S : Function unknown
COG ID : COG3516
EC number : -
Position : 3066577 - 3067101 bp
Length : 525 bp
Strand : -
Note : TIGRFAM: type VI secretion protein, VC_A0107 family; PFAM: conserved hypothetical protein; KEGG: ypp:YPDSF_2047 hypothetical protein

DNA sequence :

ATGGTTAGCAAAAGTAATTCTCAAAAGTTTATTGCTCGAAACCGAGCGCCACGCGTGCAGATTGAATACGATGTGGAAAT
ATACGGTAGTGAAAAGAAGGTTGAATTACCTTTCGTTATGGGGGTATTAGCAGATTTATCCGGTAAACCTCTTGAGCCTT
TACCTTCAGTCGCTGACAGAAAACTGTTAGATATCGATATTGATAATTTCGATGAGCGTATGAAAGCAATGAAACCACGT
GTTGCATTCGCCGTGCTGAATACATTGACTGGGGAAGGCCAGTTAATGGTCGATATTACGTTTGAGAGTATGGATGATTT
CTCTCCTGACGCTATCGCGAAAAAAGTTGATTCATTGTCTCAATTATTAGATGCCCGAACTCAACTTGCCAACTTGCAGA
CTTATATGGATGGTAAGGCGGGTGCTGAGGAATTAGTCATGAAATTGCTGAAAGACAAATCATTACTGACAACGCTTGCA
TCCGCACCGAAAGCAAAACAATCCGCTGTTGATACTCCACAGTAA

Protein sequence :

MVSKSNSQKFIARNRAPRVQIEYDVEIYGSEKKVELPFVMGVLADLSGKPLEPLPSVADRKLLDIDIDNFDERMKAMKPR
VAFAVLNTLTGEGQLMVDITFESMDDFSPDAIAKKVDSLSQLLDARTQLANLQTYMDGKAGAEELVMKLLKDKSLLTTLA
SAPKAKQSAVDTPQ

• Homologs from PAI DB

Gene	GenBank Accn	Product	Virulance or Resistance	PAI or REI	Alignment Type	E-val	Identity
STY0297	NP_454879.1	conserved hypothetical protein	Not tested	SPI-6	Protein	4e-56	82

• Homologs from VFDB (virulence genes)

Gene	GenBank Accn	Product	ID of source DB	Alignment Type	E-val	Identity
YPTS_2763	YP_001873180.1	type VI secretion protein	VFG2069	Protein	2e-55	73