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Name : YPTS_2367 (YPTS_2367) Accession : YP_001872785.1 Strain : Yersinia pseudotuberculosis PB1/+ Genome accession: NC_010634 Putative virulence/resistance : Virulence Product : YD repeat-containing protein Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG3209 EC number : - Position : 2622535 - 2625483 bp Length : 2949 bp Strand : - Note : TIGRFAM: YD repeat protein; KEGG: yps:YPTB2294 insecticial toxin DNA sequence : ATGAACACATCACTATTCAGTAAAACCCCGGCGGTCACGGTCCTCGACAACCGTGGGCTGTCCGTGCGCAGCATCGCGTA CCATCGCCATCCCGACTCGCCGGATGACACTGGTGAGCGTATCACCCATCACCAGTATGATGCCCGTGGTTTCCTCACGC AAAGCGCCGATCCCCGCCTGCACGACACTGGTCGGGCGAACGTCAAGTACCTGTCGGACCTGGTCGGAAACGCCCTGTGT ACCGTCAGCGCCGATGTTGGTACCACTGTAGCTCTGAACGATGCCGCCGGTCGGCTATTTATGACAGTCAGTAATATTGA CACCGCTGACGACGATCTGGAGGACAGAAGCCAGGCGGTGAACCGTACCTGGCAGTATGAGGGTGCCTCACTGCCGGGAC GCCTGCTGAGCATTACAGAGCAGGTCACTGGTGAAGCCGCCCGCGTCACCGAGCGTTTTACGTATGCCGCCAACACGGAC GAGAAAAAAGCCCTGAACCTGGTCGGACAGTGCGTCAGCCACTACGACACAGCAGGTCTGAGGCAGATGGACAGTATTGC CCTGACCGGTGTGCCACTCTCCGTCACCCGCCGCTTGCTGAAGGATGCGGACAACCCGGATACCGTGGCAAACTGGCAGG GTGAGGACAGCTCCGCCTGGAATGACCAGTTGGCAGCAGACAGGCTAACCACTCTGACGACTGCGGACGCTATCGGCGCG GTGCTAACCACCACCGATACAAAAGGCAACGTGCAGCGGGTGGTGTACAACGTGGCAGGCCTGCTGTCGGGCAGTTGGCT GAGGGTGAAAGGTGGCGCGGAGCAGGTTATCGTTCAATCGTTGACGTACTCGGCAGCCGGGCAGAAGCTGCGCGAGGAGC ACGGTAACGGCGTGGTGACCACGTACACATACGAGCCGGAGACGCAACGCCTGACCGGCATCCGGACGGAGCGGTCAGCC GGACATGCATCCGGAACGAAGGTGCTTCAGGACTTGCGCTATGAGTATGATCCCGTGGGCAACGTGCAGAGCATCAGAAA CGACGCAGAAGAAACCCGCTTCTGGCGCAACCAGAAAGTGGTGCCGGAGAATACGTATGTCTACGACAGCTTGTACCAGT TGGTCAGCGCCACCGGGCGCGTGATGGTGAACGCCGGACAGCAGGGCCGCAGCCTGCCTTCCGCCACCCTTCCTATAGAG AGTTCCGCATATACAAACTACACCCACACCTATACCTACGATACCGCGGGTAACCTGACGCAGATCCGACACACCCCGGC AACCGGCAGTGGTCACACAACGGATATCACGGTCAGCGACCGCAGCAACCAGGGCGTGCTGAGCACACTGACCACAAATC CGGCAGAGGTTGACGCTCTGTTCACGGCAGGCGGCCAGCAGAAACAGCTACAGCCAGGACAGCATCTTATCTGGACAGCG CGTAACGAGCTGCTGAAGGTGACGCCGGTGGTACGGGACGGAGACAGCGATGACAGGGAAAGCTACCGTTATGACGGAAA CAGCCAGCGCATCCTGAAGGTCAGCGTGCAGAAAACGGGAGGCAGCACGCAGACGCAGCGGGTTATGTACCTGCCGAGGC TGGAACTGCGTAGCACAGCCAGCGGCGTGACAGAAACGGAAAGCCTGCAGATTATCACTGTCGGTGAGGCGGGCCGGGCG CAGGTGCAGGTGCTGCATTGGGAAAAGGGCAAGCCGGACGCTATCGATAATGACCAACTGCGCTACAGCTATGACAACTT GATCGGCAGCAGTACGCTTGAGGTGGATGGGGATGGCAATGTTATCTGCATGGAGGAATACTACCCGTACGGCGGCACGG CGGTGTGGACAGCGCACAGCCAGACGGAAGCAGACTACAAAACGATCAGATACTCAGGGAAGGAACGCGATGCGACGGGG TTGTACTACTATGGCTGGCGTTATTACCAACCTTGGGTGGGGCGCTGGCTCTCCGCAGATCCGGTGGGAACAGTGGACGG ACTGAACCTGTATTTGATGGTAGGAAATAACCCAACATCCTTCCATGACAGTAATGGCTTGATACGTGAAGGACAGAGTG CAAGGAAATTAGTGGGGGAAGCCTTTGTGCATCCTTTACATATGTCGGTGTTTGAACGCATATCCATTGAAGAGAATATG GCAATGAGCGTAAGGGAAGCGGGTATTTATACTATTTTAGCACTGGGTGAAGGTGCAGCAGCAAAAGGCCATAATATTCT TGAGAAAACAATTAAACCCGGATCCCTGAAGGCTGTCTATGAGAATAAGGCCGGAGCTGCTCTTGAACTGGCAAAAAATA GTGGTTTTATTGGCCGGGTTGGCCGGTGGAATGCGTCTGGTGTGCAGGGGGTTTATGCGTACAACAGACCAAGCGGGGAG GATTTGGTTTATCCTGCCAGCCTGCAGGATACTTCTGATAATGAATTAGTGAATGCATGGATAAAACATAAGATAATCAC GCCTTATACTGGGGATTATGACATGCACGATATTATTAAATTCAATCGTGGAAAAGGGTATGTGCCCACCGCGGAAAGCG CTGAGGAAACAGGAGTAAAAGACCTAATTAATAAAGGCGTTGCAGAAGTCGATCCCGCCCGGCCTTTTGAGTATACAGCG ATGAATGTCATTCGCCATGGGCCTCAGGTAAACTTTGTTCCTTACATGTGGGAATATGAACACGATAAAGTTGTTAGCGA TAATGGCTATCTGGGGGTAGTTGCGCGTCCAGGTCCATTCCCGATAGCAATGGTACATCAGGGGCAATGGACTGTTTTTG ACGACAGTAAAGAGCTGTTTAACTTTTACAAATCGAGTAATACTCCGCTACCAGAACACTGGCAACAGAATTTTATTGCA AGAGGCCCTGGTATAGTTGCAACTCCGCGGCATGCTGACGTTCTTGATAAACGACGAATCATGCATTAA Protein sequence : MNTSLFSKTPAVTVLDNRGLSVRSIAYHRHPDSPDDTGERITHHQYDARGFLTQSADPRLHDTGRANVKYLSDLVGNALC TVSADVGTTVALNDAAGRLFMTVSNIDTADDDLEDRSQAVNRTWQYEGASLPGRLLSITEQVTGEAARVTERFTYAANTD EKKALNLVGQCVSHYDTAGLRQMDSIALTGVPLSVTRRLLKDADNPDTVANWQGEDSSAWNDQLAADRLTTLTTADAIGA VLTTTDTKGNVQRVVYNVAGLLSGSWLRVKGGAEQVIVQSLTYSAAGQKLREEHGNGVVTTYTYEPETQRLTGIRTERSA GHASGTKVLQDLRYEYDPVGNVQSIRNDAEETRFWRNQKVVPENTYVYDSLYQLVSATGRVMVNAGQQGRSLPSATLPIE SSAYTNYTHTYTYDTAGNLTQIRHTPATGSGHTTDITVSDRSNQGVLSTLTTNPAEVDALFTAGGQQKQLQPGQHLIWTA RNELLKVTPVVRDGDSDDRESYRYDGNSQRILKVSVQKTGGSTQTQRVMYLPRLELRSTASGVTETESLQIITVGEAGRA QVQVLHWEKGKPDAIDNDQLRYSYDNLIGSSTLEVDGDGNVICMEEYYPYGGTAVWTAHSQTEADYKTIRYSGKERDATG LYYYGWRYYQPWVGRWLSADPVGTVDGLNLYLMVGNNPTSFHDSNGLIREGQSARKLVGEAFVHPLHMSVFERISIEENM AMSVREAGIYTILALGEGAAAKGHNILEKTIKPGSLKAVYENKAGAALELAKNSGFIGRVGRWNASGVQGVYAYNRPSGE DLVYPASLQDTSDNELVNAWIKHKIITPYTGDYDMHDIIKFNRGKGYVPTAESAEETGVKDLINKGVAEVDPARPFEYTA MNVIRHGPQVNFVPYMWEYEHDKVVSDNGYLGVVARPGPFPIAMVHQGQWTVFDDSKELFNFYKSSNTPLPEHWQQNFIA RGPGIVATPRHADVLDKRRIMH |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| TccC3 | AAO17204.1 | TccC3 | Virulence | tcd island | Protein | 0.0 | 61 |
| TccC4 | AAO17196.1 | TccC4 | Virulence | tcd island | Protein | 2e-172 | 59 |
| TccC5 | AAO17210.1 | TccC5 | Virulence | tcd island | Protein | 5e-171 | 56 |
| tccC | CAI77380.1 | putative insecticidal toxin complex protein | Not tested | tc-PAIYe | Protein | 2e-135 | 50 |
