Gene Information

Name : YPTS_1975 (YPTS_1975)
Accession : YP_001872398.1
Strain : Yersinia pseudotuberculosis PB1/+
Genome accession: NC_010634
Putative virulence/resistance : Unknown
Product : HpcH/HpaI aldolase
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG2301
EC number : -
Position : 2180049 - 2180891 bp
Length : 843 bp
Strand : -
Note : PFAM: HpcH/HpaI aldolase; KEGG: ypp:YPDSF_1196 citrate lyase beta chain

DNA sequence :
ATGTCTAATCTTGATACTTACCAAACCCGCAGTTGGCTCTTTACGCCAGCCACTCGCTCGGATCGCTTTGCTAAAGCGGC
TGAAAACGGTGCAGATGTCGCCATTATTGATCTTGAAGATTCGGTCTCTCAAGCGGATAAGGAGCAGGCCCGACAAAAAG
CCATCTCTTATCTCTCTTCACGTCCGGCTACATCACTACCGCTGGCACTACGGATCAACGGACTGGATACTCGTGCCGGT
ATTGAGGATATTCACGCCTTACTCGAATGTGGCAGCCTTCCCGATTACCTAGTCCTTCCTAAAACGGAGTCAGCGGCTCA
TCTGCAGATTCTGGATCGCCTAATGATGTTCGCAGGCTCTGATACGCGCCTTATCGGCATCATTGAATCTGTACGTGGCC
TCAACGCTGTTGAGTCTATTGCTGCTGCCACCCCAAAATTGGCCGGATTGATATTTGGTGCTGCGGACATGGCCGCCGAT
ATTGGCGCAGCATCCACCTGGGAACCGCTAGCGCTGGCGCGTGCCCGGTTAGTCTCCGCCTGTGCGATGAATGGCATTCC
CGCTATTGATGCCCCTTTTTTTGATGTCCACGATGTTTCAGGCCTACAGTCTGAGACCCTTCGCGCATCTGATTTCGGCT
TTTCTGCAAAAGCGGCCATTCATCCCGCACAAATCAGCACAATCAATACCTTATTTACCCCCACTGCAGCAGAGATACGC
CATGCCCGCGCAGTGCTCGCCGAGAATACCAAAGGGGTCGGGACCGTCAACGGAATGATGATCGATGAGGCTGTTGCACG
TCAGGCCCGCCGGGTACTTACCCGAGCGGGTATCTCTGCCTGA

Protein sequence :
MSNLDTYQTRSWLFTPATRSDRFAKAAENGADVAIIDLEDSVSQADKEQARQKAISYLSSRPATSLPLALRINGLDTRAG
IEDIHALLECGSLPDYLVLPKTESAAHLQILDRLMMFAGSDTRLIGIIESVRGLNAVESIAAATPKLAGLIFGAADMAAD
IGAASTWEPLALARARLVSACAMNGIPAIDAPFFDVHDVSGLQSETLRASDFGFSAKAAIHPAQISTINTLFTPTAAEIR
HARAVLAENTKGVGTVNGMMIDEAVARQARRVLTRAGISA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
citE AAK97548.1 CitE Not tested SPI-6 Protein 1e-89 73