|
Name : YPTS_1927 (YPTS_1927) Accession : YP_001872351.1 Strain : Yersinia pseudotuberculosis PB1/+ Genome accession: NC_010634 Putative virulence/resistance : Unknown Product : Hcp1 family type VI secretion system effector Function : - COG functional category : S : Function unknown COG ID : COG3157 EC number : - Position : 2138668 - 2139012 bp Length : 345 bp Strand : - Note : TIGRFAM: type VI secretion system effector, Hcp1 family; PFAM: protein of unknown function DUF796; KEGG: yps:YPTB1881 hypothetical protein DNA sequence : ATGAGTTTTAATACCTATTTAAAATTAACAGGAAGTGAACAAGGATTAATCTCTGCTGGATGCAGTTCATTTGACTCGAT TGGAAATCGACATCAGAATGATCATGACGATGAAATTCAGATACTATCCTTAAATCACGCCATAACAAGAGAGCAACATT GTACACATCATCCTGTTGAATTTATCAAACCAATTGACAAATTATCACCACTAATGGCTATAGCCATATCCAATAATGAA ATATTAACCCCATCATTTTCAATTTATAGATTAAATCAATTTGGTGCTTTGGGAATATTTTATGAGATAAAATTAACTAA AGCTACGATAATAGATATCAGTTAA Protein sequence : MSFNTYLKLTGSEQGLISAGCSSFDSIGNRHQNDHDDEIQILSLNHAITREQHCTHHPVEFIKPIDKLSPLMAIAISNNE ILTPSFSIYRLNQFGALGIFYEIKLTKATIIDIS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| APECO1_2644 | YP_859414.1 | hypothetical protein | Not tested | Not named | Protein | 2e-12 | 48 |
| aec32 | YP_851413.1 | hypothetical protein | Not tested | PAI II APEC-O1 | Protein | 2e-21 | 47 |
| aec32 | AAQ96726.1 | Aec32 | Not tested | AGI-1 | Protein | 1e-21 | 47 |
