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Name : YPTS_1897 (YPTS_1897) Accession : YP_001872321.1 Strain : Yersinia pseudotuberculosis PB1/+ Genome accession: NC_010634 Putative virulence/resistance : Unknown Product : PBSX family phage portal protein Function : - COG functional category : R : General function prediction only COG ID : COG5518 EC number : - Position : 2121519 - 2122556 bp Length : 1038 bp Strand : + Note : TIGRFAM: phage portal protein, PBSX family; PFAM: portal protein; KEGG: yps:YPTB1860 similar to capsid portal protein bacteriophage 186 DNA sequence : ATGAGTAAACGCAACAGGAAAACCCGCTCGGCCAAGGTGACAACAGCTATGGCGGGCAATAGTGCCGCACAGGCTGAGGC GTTTACTTTTGACGACCCGATCCCAATGATGGATCGGCGCGATATTCTGGATTATTTGGAATGTGCCGTGATGGATCGCT GGTATGAGCCGCCGGTGTCATTCAACGGTCTGGCTAAGTCATTTCGTGCGGCGGTGCATCACAGCTCGCCAATCTATATG AAACGCAATGTACTGGTTAGTCTGTTTGAGCCGCACCGATTACTCTCGAAACAGGATTTTAGCTGTTATGCGCTGGATTT TTTGGTATTCGCCAACTCGTTTTTAGAAGCCCGCTATAATCGGTTGGGGGGATTGATGAAGCTAGTGCCTAGCCCGGCCA AATATACTCGCCGCGGCGTGGAGGCGGACACCTATTGGTATGTCTCATCCTATGCCAACCCACACCCGTTTGAAGCCAAT AGCGTTTTTCACCTGCTAGACCCGGATATTAATCAGGAGATCTACGGCGTTCCTGAATACCTCGCCTCGCTAAACTCCAC TTGGCTTAATGAGGCCGCAACGCTATTTCGCCGTAAATATTATCTGAATGGCAGTCACGCTGGATTTATTCTGTATATGA ACGACGCCGCCCATAAACAGGAGGATATCGACGCCTTACGTAAGGCGCTGAAAGAGTCCAAAGGGCCGGGCAATTTCCGC AATCTGTTTATGTACGCCCCAGCGGGTAAAAAAGACGGGATACAGGTAATCCCACTGGCCGAGGTCGCGGCTAAAGATGA ATTCGCCAGCATTAAGAATGTCACCCGCGACGACCAACTTGCGATGCAGCGGGTACCACCTCAATTGATGGGTATTTTAC CCAACAACACCGGCGGTTTTGGTGATGTGGAAAAAGCCGCACGGGTATTTGCCATTAACGAACTGGCCCCCTTGCAGGAA CGGCTGATGGAAATTAACGACTGGGTAGGGGATGAGGTGGTGAGGTTCAAGGCGTATGAGTTGCTTTCAAAGGAATAG Protein sequence : MSKRNRKTRSAKVTTAMAGNSAAQAEAFTFDDPIPMMDRRDILDYLECAVMDRWYEPPVSFNGLAKSFRAAVHHSSPIYM KRNVLVSLFEPHRLLSKQDFSCYALDFLVFANSFLEARYNRLGGLMKLVPSPAKYTRRGVEADTYWYVSSYANPHPFEAN SVFHLLDPDINQEIYGVPEYLASLNSTWLNEAATLFRRKYYLNGSHAGFILYMNDAAHKQEDIDALRKALKESKGPGNFR NLFMYAPAGKKDGIQVIPLAEVAAKDEFASIKNVTRDDQLAMQRVPPQLMGILPNNTGGFGDVEKAARVFAINELAPLQE RLMEINDWVGDEVVRFKAYELLSKE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| STY4628 | NP_458710.1 | probable capsid portal protein | Not tested | SPI-7 | Protein | 4e-115 | 64 |
| t4321 | NP_807917.1 | capsid portal protein | Not tested | SPI-7 | Protein | 4e-115 | 64 |
| unnamed | ABR13463.1 | predicted capsid packaging protein | Not tested | PAGI-6 | Protein | 3e-89 | 56 |
