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Name : YPTS_1883 (YPTS_1883) Accession : YP_001872307.1 Strain : Yersinia pseudotuberculosis PB1/+ Genome accession: NC_010634 Putative virulence/resistance : Unknown Product : Hcp1 family type VI secretion system effector Function : - COG functional category : S : Function unknown COG ID : COG3157 EC number : - Position : 2112506 - 2112985 bp Length : 480 bp Strand : + Note : TIGRFAM: type VI secretion system effector, Hcp1 family; PFAM: protein of unknown function DUF796; KEGG: ypi:YpsIP31758_1346 hypothetical protein DNA sequence : ATGGCCAACTCTATTTATTTAACGTTGCAAGGTGCGAAACAAGGTTTAATATCCGCTGGCTGCGGTTCATTAGATTCTAT TGGCAATAAGTCGCAATCAACACATCAGGATCAAATCTTCATTCATGCATTGCAACATATGATATCTCGTGCTCAAAACT CCCATCATCATCCAATAGTTTTTAGAAAACCCATTGATAAATCATCGCCTTTGCTGGGTATCTCTATCTCTGAAAATGAA AGCCTTGAGTGTCTTTTCGATTTTTATCGAACGAACAGTGAGGGTTCTCAGGAGAAGTATTACACTATCAAACTGACTAA TGCAGCACTGACTAATATCCATATAGATTATCCTCATTCATTGACTCATGCCGGCATGCAACCGGAAGAGCATGTATCAG TTCGTTATGAAAGTATTATCTGGCAGCACCATGTCGCTGGAACATCAGGTTATAGCATTTGGAATGACCGCGTTTTATAA Protein sequence : MANSIYLTLQGAKQGLISAGCGSLDSIGNKSQSTHQDQIFIHALQHMISRAQNSHHHPIVFRKPIDKSSPLLGISISENE SLECLFDFYRTNSEGSQEKYYTIKLTNAALTNIHIDYPHSLTHAGMQPEEHVSVRYESIIWQHHVAGTSGYSIWNDRVL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| aec32 | YP_851413.1 | hypothetical protein | Not tested | PAI II APEC-O1 | Protein | 2e-41 | 58 |
| aec32 | AAQ96726.1 | Aec32 | Not tested | AGI-1 | Protein | 2e-41 | 58 |
| orf23 | AAO17189.1 | Orf23 | Not tested | tcd island | Protein | 2e-39 | 52 |
