Gene Information

Name : YPTS_1875 (YPTS_1875)
Accession : YP_001872299.1
Strain : Yersinia pseudotuberculosis PB1/+
Genome accession: NC_010634
Putative virulence/resistance : Unknown
Product : phage major tail tube protein
Function : -
COG functional category : R : General function prediction only
COG ID : COG3498
EC number : -
Position : 2106017 - 2106532 bp
Length : 516 bp
Strand : -
Note : TIGRFAM: phage major tail tube protein; PFAM: major tail tube protein; KEGG: yps:YPTB1840 putative P2 tail tube protein

DNA sequence :
ATGGCATTACCACGCAAGCTTAAGTTCCTCAATGTGTTCAATGACGGGAACAGCTATCAGGGGGTGGTTGAATCCATCAC
CTTGCCAAAATTAAACCGCAAATTTGAAGACTTTCGCGGGGGCGGGATGAATGGCAGCGCCAAGGTCGATTTGGGGCTGG
CTGATGGGGCGCTGGACGTTGACTGGACGCTGGGCGGTATTGAGTCCGAGATCTACAAGCAATGGGGCGTGACCAAAGTC
GATGGTGTGTTACTGCGTTTTGCTGGCTCCTATCAGCGCGACGATACCGGCGAAACCCACGCGGTAGAAATTGTCCTCCG
TGGTCGCCACGAAGAAATCGACGGCGGTGACAGCAAACAAGGCGATAACAGCACCACAAAAATCTCCACAAAATGTACTT
ACTACAAATTGGCATGGGATGGCGAAGTGCTGATCGAGATCGACATTGTGAACATGGTCGAAATGGTCAGCGGCGTCGAT
ATGCTGGAAGCCCACCGCCGCAACATCGGCCTGTAA

Protein sequence :
MALPRKLKFLNVFNDGNSYQGVVESITLPKLNRKFEDFRGGGMNGSAKVDLGLADGALDVDWTLGGIESEIYKQWGVTKV
DGVLLRFAGSYQRDDTGETHAVEIVLRGRHEEIDGGDSKQGDNSTTKISTKCTYYKLAWDGEVLIEIDIVNMVEMVSGVD
MLEAHRRNIGL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY4606 NP_458689.1 probable major tail tube protein Not tested SPI-7 Protein 1e-40 61
t4300 NP_807897.1 major tail tube protein Not tested SPI-7 Protein 1e-40 61
unnamed ABR13485.1 phage tail tube protein Not tested PAGI-6 Protein 6e-44 58