|
Name : fliP (YPTS_1822) Accession : YP_001872246.1 Strain : Yersinia pseudotuberculosis PB1/+ Genome accession: NC_010634 Putative virulence/resistance : Virulence Product : flagellar biosynthesis protein FliP Function : - COG functional category : N : Cell motility COG ID : COG1338 EC number : 3.1.1.3 Position : 2051856 - 2052680 bp Length : 825 bp Strand : - Note : FliP, with proteins FliQ and FliR, forms the core of the central channel in the flagella export apparatus DNA sequence : ATGACGTCCCATCGCCCTGTTTTTATTAGCAAACGTTCTCTCATCACTGGCGCGCTGTTCTGCCGGATGTGGCGCACCAT AATAATGTCGGTTATCAATAAAACCACACTGGGGCTGCTCACCTTATTTTGCTCGCCTTCGGTATTGGCTCAACTGCCTG GGATCATCAGCCAACCGTTGGCTAATGGTGGACAGAGTTGGTCTTTACCCGTGCAAACGCTGGTGTTCATCACCACGCTG AGTTTTTTGCCCGCGGCGTTACTGATGATGACCAGTTTTACCCGCATCATTATTGTGCTCGGGTTACTGCGTAACGCGAT GGGCACCCCTTCGGCCCCGCCGAATCAGGTGATGCTGGGGCTGGCACTGTTTCTGACCTTTTTTATTATGTCACCGGTGT TTGACAAAGTGTATCAAGAGGCTTATCTGCCCTTCAGTCAGGATAAAATCAGCATGGACGTGGCGTTGGATAAAGGCTCA CAACCGTTGCGGGAGTTTATGCTGCGCCAAACGCGGGAATCTGATCTGGCGCTGTATGCCCGGTTGGCAAACCTGCCGCC GCTGGAAGGCCCCGAAATGGTTCCGATGCGTATTCTGCTGCCCGCCTATGTCACCAGTGAGTTGAAAACGGCATTCCAAA TTGGTTTTACCGTATTTATTCCGTTCCTGATTATCGATTTGGTGGTCGCCAGTGTGCTGATGGCGCTGGGGATGATGATG GTTCCGCCTGCCAGTATCTCGCTACCGTTCAAGCTGATGCTATTTGTTCTGGTTGATGGCTGGCAATTGTTACTGGGTTC ACTGGCACAGAGTTTTTATAGCTGA Protein sequence : MTSHRPVFISKRSLITGALFCRMWRTIIMSVINKTTLGLLTLFCSPSVLAQLPGIISQPLANGGQSWSLPVQTLVFITTL SFLPAALLMMTSFTRIIIVLGLLRNAMGTPSAPPNQVMLGLALFLTFFIMSPVFDKVYQEAYLPFSQDKISMDVALDKGS QPLREFMLRQTRESDLALYARLANLPPLEGPEMVPMRILLPAYVTSELKTAFQIGFTVFIPFLIIDLVVASVLMALGMMM VPPASISLPFKLMLFVLVDGWQLLLGSLAQSFYS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hrcR | ABA47279.1 | HrcR | Virulence | S-PAI | Protein | 1e-27 | 44 |
| hrcR | BAB07862.1 | HrcR | Virulence | Hrp PAI | Protein | 4e-31 | 41 |
| hrcR | AAP34349.1 | HrcR | Virulence | Hrp PAI | Protein | 5e-32 | 41 |
| hrcR | ABQ88359.1 | HrcR | Virulence | Hrp PAI | Protein | 5e-20 | 41 |
| hrpW | AAB05075.1 | HrpW | Virulence | Hrp PAI | Protein | 5e-20 | 41 |
| XC_3016 | YP_244084.1 | type III secretion system protein | Virulence | Hrp PAI | Protein | 2e-32 | 41 |
| hrcR | NP_636600.1 | type III secretion system protein | Virulence | Hrp PAI | Protein | 2e-32 | 41 |
| hrcR | AAT96146.1 | HrcR | Virulence | T-PAI | Protein | 6e-21 | 41 |
| hrcR | AAT96200.1 | HrcR | Virulence | T-PAI | Protein | 6e-21 | 41 |
| escR | AFO66317.1 | putative LEE-encoded type III secretion system factor | Virulence | SESS LEE | Protein | 1e-27 | 41 |
| escR | AFO66400.1 | putative LEE-encoded type III secretion system factor | Virulence | SESS LEE | Protein | 1e-27 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| fliP | YP_001872246.1 | flagellar biosynthesis protein FliP | VFG2338 | Protein | 3e-100 | 97 |
| fliP | YP_001872246.1 | flagellar biosynthesis protein FliP | VFG2494 | Protein | 5e-73 | 68 |
| fliP | YP_001872246.1 | flagellar biosynthesis protein FliP | VFG1259 | Protein | 8e-61 | 57 |
| fliP | YP_001872246.1 | flagellar biosynthesis protein FliP | VFG2016 | Protein | 2e-60 | 56 |
| fliP | YP_001872246.1 | flagellar biosynthesis protein FliP | VFG0188 | Protein | 3e-30 | 43 |
