Gene Information

Name : YPTS_1760 (YPTS_1760)
Accession : YP_001872184.1
Strain : Yersinia pseudotuberculosis PB1/+
Genome accession: NC_010634
Putative virulence/resistance : Resistance
Product : MarR family transcriptional regulator
Function : -
COG functional category : K : Transcription
COG ID : COG1846
EC number : -
Position : 1988022 - 1988489 bp
Length : 468 bp
Strand : -
Note : TIGRFAM: homoprotocatechuate degradation operon regulator, HpaR; PFAM: regulatory protein MarR; KEGG: ypi:YpsIP31758_2366 homoprotocatechuate degradation operon regulator, HpaR

DNA sequence :
ATGCATGAATCACTGACCATCGCATTATTGCAGGCTCGTGAAGCCGCTATGGCTTTTTTTCGGCCTATCTTGAAAGCCAA
TCATCTGACTGAGCAGCAATGGCGGATCATTCGAGTGCTCGCGGATAATCGCTCAATAGATTTTCATGGGCTGGCCCGCC
AAACCTGTATTTTACGTCCAAGCCTAACGGGGATTTTGACGCGAATGGAGCGTAACAATTTGATTTTTCGCCTCAAACCC
GTCAACGATCAGCGCAAACTTTATGTCTCCTTAACTCAGGAGGGACAAAATTTGTATGACAACGCTCGGCCACAGGTTGA
AGAAGGTTACAGGCTAATTGAGGCAGCATTTTCACCAGATAAAATGGCGCAACTCTCTTTACTGCTGGATGAATTCATTA
CCGTGGGTAATAAACATCGGCAAGCGAATGAGATGTCAGAAAATGAGATGTTAGAAGATGAAGAGTGA

Protein sequence :
MHESLTIALLQAREAAMAFFRPILKANHLTEQQWRIIRVLADNRSIDFHGLARQTCILRPSLTGILTRMERNNLIFRLKP
VNDQRKLYVSLTQEGQNLYDNARPQVEEGYRLIEAAFSPDKMAQLSLLLDEFITVGNKHRQANEMSENEMLEDEE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hpcR AAO17176.1 HpcR Not tested tcd island Protein 2e-51 78

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
YPTS_1760 YP_001872184.1 MarR family transcriptional regulator BAC0505 Protein 5e-34 56