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Name : YPTS_1596 (YPTS_1596) Accession : YP_001872022.1 Strain : Yersinia pseudotuberculosis PB1/+ Genome accession: NC_010634 Putative virulence/resistance : Virulence Product : type VI secretion ATPase Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 1782782 - 1785430 bp Length : 2649 bp Strand : + Note : KEGG: yps:YPTB1489 Clp ATPase; TIGRFAM: type VI secretion ATPase, ClpV1 family; PFAM: AAA ATPase central domain protein; Clp domain protein; ATPase associated with various cellular activities AAA_5; ATPase AAA-2 domain protein; SMART: AAA ATPase DNA sequence : ATGACAACGCATTCAGCACACTTATTACGTCGGTTAAATCCCTATTGCGCACAGGCACTGGCCGGTGCCGCCACCCTGTG TCAGACCCGCGCCCATGCTGAGATCACTGTCGAACACTGGTTGTTAAAATTGCTGGAGCAGGGCGAAGGCGATATTACAG TCATTGCCCGGCGTTATGAGTGGGACATGGACAGCCTGTGGCAGGGATTACTGGCCCATCTGGACACCTTGCCGCGCACG GTACAGGGCAAACCTCAGTTGTCCGCCGCGTTACAGCAACTGATCAAAAACGCCTGGCTAGATGCCTCGTTGCAGGAAGA TGCCGATGCGGTGCGTTCCGTTCATCTGTTATCTGCTCTGATAAATTCGCCATCATTACTGGCCGCCGATGCCGCCTGGC CGTTGCTCAGCCTGAGTACCACCCAGTTACACCGCCTGTTACCGCTACTGGACAGCCAATCAGACGAACGCCCTGAAGTT CAGCAGGCAGCGGCACTGGCAGACAGCCCGGTCAATCTGACCAATGAGGCAGCGACTACTACCTCTGCCAGCGGCCAGCC GCAACTCAATGACGCCCTGCAAGCGGCGCTGGATAAATTTACGTTGGACGTCACCGCCAAAGCGAAAACCGGGCAGATTG ACCCGATTTTTGGTCGCGACAGCGAGATCCGCCAGATGGTCGATATCCTGTCGCGCCGCCGTAAAAATAACCCGATTCTG GTCGGTGAACCGGGTGTGGGTAAAACCGCCTTGGTTGAAGGGCTGGCACTGCGTATTGCCGAGGGCAACGTACCGGACAG CTTAAAAACCGTCAGTGTGCGCACTCTGGACTTGGGCCTGTTGCAAGCCGGGGCTGGGGTCAAAGGTGAGTTCGAACAGC GGCTGAAAAATGTTATCGAGGCGGTACAACAATCACCGACGCCGGTGCTGCTGTTTATCGACGAAGCCCACACCATCATC GGTGCCGGTAATCAGGCCGGTGGCGCAGATGCGGCCAACCTGCTGAAACCGGCACTGGCGCGTGGCGAGTTGCGCACCAT CGCCGCCACCACCTGGTCCGAATACAAACAGTATTTTGAACGCGATGCCGCACTGGAGCGCCGCTTCCAGATGGTCAAAG TGGACGAGCCGGATGATGACACCGCCTGCCTGATGCTGCGTGGCCTGAAAGAACGTTACGCCACCCATCACGGCGTGCAT ATTCTGGACGCCGCTATCACCGCAGCGGTTACCCTGTCGCGCCGCTTTCTGACCGGTCGCCAACTGCCGGACAAAGCGGT GGATCTTCTCGACACCGCAGGTGCGCGCGTGCGCATGAGCATCGACACCTTGCCGACTGCGTTGATGGAGATTAACGCCG AACTGGCCGCACTGGCGATGGAGCAACAGGCCATCGAACAGGACTTGCTCCTGCTGCCGAATGTCAGTTCAACGCGCTTA CCTGAGATTGAGCAACGCCGCGCCGCGCTGGCGGTTGGGCAGCAAACACTCGAACAGCAATATAAAGAAGAGAAGCGGTT GACCACCCTGATTATTGAGGCGCGTCAGGACATCGCCAACGCAGCACATCTGGTCGCGTTGCAGGAGGAACTCGTTCAGA TTCAGGGCAATGCGCCGCTGTTGTCGCTGGACGTTGATGTGCGCACTGTTGCGGCTGTGATCGCCGACTGGACCGGTGTG CCGCTGGGCAGTTTACTCAAAGACGAACAAACCAACTTGCTGTCACTGGAAAATCGTCTGGGCGAGCGAGTAATTGGGCA GGATGCGGCATTAGGCGCGCTGGCGCAACGGCTGCGGGCGGCGAAAACCGGCCTGACATCAGAGAATGGTCCGCTGGGGG TGTTCCTGCTGGTCGGGCCGAGTGGGATCGGCAAAACCGAAACCGCGCTGGCACTGGCCGACAGCCTGTTCGGCGGGGAA AAATCGCTGATTACCATCAACTTATCGGAGTATCAGGAAGCACACACCGTCTCCCAATTGAAAGGGGCGCCCCCGGGCTA TGTCGGTTACGGACAGGGCGGCGTATTGACCGAAGCGGTGCGCAAACGGCCTTACAGCGTGGTGCTGCTGGATGAAGTCG AGAAGGCCCATCGTGATGTGCTGAACCTGTTCTATCAGGTGTTTGACCGCGGTTTTATGCGCGACGGTGAAGGGCGCGAA ATTGATTTCCGCAACACGGTGATAGTGATGACCGCCAATCTGGGCAGTGATCATCTGATGCAGTTGCTGGATGAGCAACC GGACGCGCCGGACAGCACCCTGCATGAACTGCTGCGGCCAATATTGCGCGACCACTTCCAGCCCGCGCTGCTGGCCCGCT TCCAGACGCTGATCTACCGCCCACTGAATGCCCCCGCGCTGCGCACCATCGTCGAAATGAAACTGGCACAGGTCGCTAAC CGCCTCAAAAAACATTACGGCCTGCACTGCACTCTTGAAGCAAGCCTGTACGACACACTGGTCGCCGCCTGCCTGCTGCC GGACACCGGCGCACGCAACATCGACAGCCTGCTCAATCAGCAGATTTTACCGGTATTGAGCCAGCAGCTGTTAAGCCGCA TGAGCGAGCAACAGCGCACCACCTCGCTGACGCTGGGCTGGGATGAAGCCGACGGCATTACCCTTGAATTTGAAGGAGGC GAAAAATGA Protein sequence : MTTHSAHLLRRLNPYCAQALAGAATLCQTRAHAEITVEHWLLKLLEQGEGDITVIARRYEWDMDSLWQGLLAHLDTLPRT VQGKPQLSAALQQLIKNAWLDASLQEDADAVRSVHLLSALINSPSLLAADAAWPLLSLSTTQLHRLLPLLDSQSDERPEV QQAAALADSPVNLTNEAATTTSASGQPQLNDALQAALDKFTLDVTAKAKTGQIDPIFGRDSEIRQMVDILSRRRKNNPIL VGEPGVGKTALVEGLALRIAEGNVPDSLKTVSVRTLDLGLLQAGAGVKGEFEQRLKNVIEAVQQSPTPVLLFIDEAHTII GAGNQAGGADAANLLKPALARGELRTIAATTWSEYKQYFERDAALERRFQMVKVDEPDDDTACLMLRGLKERYATHHGVH ILDAAITAAVTLSRRFLTGRQLPDKAVDLLDTAGARVRMSIDTLPTALMEINAELAALAMEQQAIEQDLLLLPNVSSTRL PEIEQRRAALAVGQQTLEQQYKEEKRLTTLIIEARQDIANAAHLVALQEELVQIQGNAPLLSLDVDVRTVAAVIADWTGV PLGSLLKDEQTNLLSLENRLGERVIGQDAALGALAQRLRAAKTGLTSENGPLGVFLLVGPSGIGKTETALALADSLFGGE KSLITINLSEYQEAHTVSQLKGAPPGYVGYGQGGVLTEAVRKRPYSVVLLDEVEKAHRDVLNLFYQVFDRGFMRDGEGRE IDFRNTVIVMTANLGSDHLMQLLDEQPDAPDSTLHELLRPILRDHFQPALLARFQTLIYRPLNAPALRTIVEMKLAQVAN RLKKHYGLHCTLEASLYDTLVAACLLPDTGARNIDSLLNQQILPVLSQQLLSRMSEQQRTTSLTLGWDEADGITLEFEGG EK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| STY0294 | NP_454876.1 | ClpB-like protein | Not tested | SPI-6 | Protein | 7e-136 | 44 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| YPTS_1596 | YP_001872022.1 | type VI secretion ATPase | VFG2084 | Protein | 1e-134 | 43 |
| YPTS_1596 | YP_001872022.1 | type VI secretion ATPase | VFG2076 | Protein | 6e-149 | 43 |
