Gene Information

Name : YPTS_1326 (YPTS_1326)
Accession : YP_001871758.1
Strain : Yersinia pseudotuberculosis PB1/+
Genome accession: NC_010634
Putative virulence/resistance : Unknown
Product : ABC transporter-like protein
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG1125
EC number : -
Position : 1474192 - 1475130 bp
Length : 939 bp
Strand : +
Note : PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: yps:YPTB1238 ABC type choline/glycine/betaine transporter, ATP-binding subunit

DNA sequence : 
ATGATTCAATTCCATCAAGTCAGTAAGTATTTTGCCGGTAAACGGGCGGTAGATAACCTATCCCTACAGATTTCTAAAGG
GGAGTTTACCGTGCTGATAGGTACCTCCGGTTCTGGTAAGTCAACCACCTTAAAAATGATTAACAGGTTGATTGAACACG
ATGAAGGAAAAATCCGTTTTGCCGGTGAGGAGATCCGTAACTATAAACCTGAAGATTTACGGCGGCGCATGGGGTATGCG
ATTCAATCAATAGGGCTATTTCCACATTGGACGGTAGAACGCAATATTGCCACGGTGCCACAGTTGCTGAAATGGCCAAA
GGATCGTATCCGTCAACGTGTTGTTGAACTGCTGGAACTGTTGCATCTGGATCCACAACAGTTTTGTCACCGCTATCCTC
ATCAATTATCTGGAGGGCAGCAACAGAGGGTTGGGGTCGCGAGAGCGTTGGCGGTGGATCCTGAAGTGCTATTGATGGAT
GAACCTTTTGGTGCGTTGGATCCGGTAACGCGTTCAGCGTTGCAGCTTGAAATTACCCGTATTCATCAATTGTCGGGGCG
CACTATCGTGCTGGTTACCCATGATATTGATGAGGCATTGAGTCTGGCTGATCGCATCGTTTTGATGGATGAAGGGCGAG
TTATTCAGCAGGGAACGCCCCTTGAAATGTTGGCCCAGCCTGCCAATGATTTTGTCCGTGATTTCTTTGGCCGCAGTGAT
CTCGGTATTAAATTATTGTCACTTGGGCGAGTAGAACAACGTGTTAGATGTGGTGAAACGCTGGCAGGGCAGCCGATACT
GGGTACCACCAGCTTGCGCGAGGCACTTTCCCTGTTTGTTTCCCGTCAGACGGATAAATTACCGGTTGCTAATGAACACG
GGCAGCCACTAGGCGTTCTCTATTTTGCTGATTTGGTTGCGAATAAGGAAAGAGTATGA

Protein sequence : 
MIQFHQVSKYFAGKRAVDNLSLQISKGEFTVLIGTSGSGKSTTLKMINRLIEHDEGKIRFAGEEIRNYKPEDLRRRMGYA
IQSIGLFPHWTVERNIATVPQLLKWPKDRIRQRVVELLELLHLDPQQFCHRYPHQLSGGQQQRVGVARALAVDPEVLLMD
EPFGALDPVTRSALQLEITRIHQLSGRTIVLVTHDIDEALSLADRIVLMDEGRVIQQGTPLEMLAQPANDFVRDFFGRSD
LGIKLLSLGRVEQRVRCGETLAGQPILGTTSLREALSLFVSRQTDKLPVANEHGQPLGVLYFADLVANKERV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
opuBA YP_005124363.1 choline transport system ATP-binding protein Not tested Not named Protein 5e-54 52
opuBA NP_938494.1 choline transport system ATP-binding protein Not tested Not named Protein 1e-54 52