Gene Information

Name : YPTS_1202 (YPTS_1202)
Accession : YP_001871634.1
Strain : Yersinia pseudotuberculosis PB1/+
Genome accession: NC_010634
Putative virulence/resistance : Virulence
Product : HSR1-like GTP-binding protein
Function : -
COG functional category : R : General function prediction only
COG ID : COG3596
EC number : -
Position : 1347093 - 1347980 bp
Length : 888 bp
Strand : -
Note : PFAM: GTP-binding protein HSR1-related; KEGG: eca:ECA2860 hypothetical protein

DNA sequence :
ATGAAACAATCCTCAGGCTATGCCCTTATCCGGCGTCATCTCAGGCGCTACCCTCATGCACTGCGACAGCATTTAATTAA
AGAACTCAATCAACTGGTCACGTATGAACCCGTAATTGGCATTATGGGTAAAACCGGCGTCGGCAAATCCTCGATGTGTA
ATGCCCTATTCCGAGGTGACGTTTGTGCCGTCAATGCCGTAGAGGCCTGCACCCGTCAGCCACAGCGGATACGTCTTCGC
TTTGGCTCTCATTACCTTACGCTCATTGATTTACCTGGTGTGGGTGAGAACCAGCAGCGTGATGAAGAGTATCGTGAACT
ATATAGGGAACTGATGCCACAGCTCGATATGGTCCTGTGGGTACTCAAAGCTGATGACCGGGCATTCTCGGTGGAAGAGC
AATTTTATCAGGCAGTCTTCGCGCAGCACCCGGGTTCGTTACCGCCTGTGCTATGGATACTCAATCAAGTAGACAAAACG
GAGCCTGCGGAGCAGTGGAACTGGCCTTCAGCGCAACCTTCAGCAACACAGGTTGAGCATATTGTACAAAAGAAAAAAGC
AGTAGCCAGACAAATGGGGATTACAGAGAGCTGTGTCCTGCCTGTTTCAGTCAAGGGTCGGTATCATCTTCCCCGCCTGG
TGGAGGCCATCATTACCCGACTCCCAAAGCAGGCTCGGAGTCCACTGGTTCCCCATCTTCAAATGGGATATCACACTCCC
CATATTATTAACCATGCCCGTAGTGGCTTTGGTGATGCTGTTGTAGATGTTATTGAGCGGGTAATTGACATGGCCCCACT
CCCACAGATTGCCCGAAGCGCGTTACAAGCGATGACTCACACTGTAGCCAGGGCTGCACGCTCCGCCTGGTCTTTCTTCT
TTGGTTGA

Protein sequence :
MKQSSGYALIRRHLRRYPHALRQHLIKELNQLVTYEPVIGIMGKTGVGKSSMCNALFRGDVCAVNAVEACTRQPQRIRLR
FGSHYLTLIDLPGVGENQQRDEEYRELYRELMPQLDMVLWVLKADDRAFSVEEQFYQAVFAQHPGSLPPVLWILNQVDKT
EPAEQWNWPSAQPSATQVEHIVQKKKAVARQMGITESCVLPVSVKGRYHLPRLVEAIITRLPKQARSPLVPHLQMGYHTP
HIINHARSGFGDAVVDVIERVIDMAPLPQIARSALQAMTHTVARAARSAWSFFFG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Z1210 NP_286745.1 histone Not tested TAI Protein 2e-41 42
unnamed CAD66199.1 hypothetical protein Not tested PAI III 536 Protein 2e-42 42
Z1650 NP_287153.1 hypothetical protein Not tested TAI Protein 2e-41 42
unnamed AAL08471.1 unknown Not tested SRL Protein 1e-42 42
sap NP_838477.1 hypothetical protein Not tested SHI-1 Protein 7e-42 42
ECO103_3582 YP_003223441.1 hypothetical protein Not tested LEE Protein 5e-42 42
aec64 AAW51747.1 Aec64 Not tested AGI-3 Protein 3e-42 42
yeeP ADD91709.1 YeeP Not tested PAI-I AL862 Protein 3e-42 42
yeeP CAE85196.1 YeeP protein Not tested PAI V 536 Protein 3e-42 42
unnamed AAL99256.1 unknown Not tested LEE Protein 1e-41 41
sap NP_708764.1 hypothetical protein Not tested SHI-1 Protein 3e-41 41
unnamed AAK00473.1 unknown Not tested SHI-1 Protein 2e-41 41
APECO1_1093 YP_853113.1 hypothetical protein Not tested PAI IV APEC-O1 Protein 3e-41 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
YPTS_1202 YP_001871634.1 HSR1-like GTP-binding protein VFG1674 Protein 1e-42 42
YPTS_1202 YP_001871634.1 HSR1-like GTP-binding protein VFG1062 Protein 6e-43 42
YPTS_1202 YP_001871634.1 HSR1-like GTP-binding protein VFG0654 Protein 1e-41 41