Gene Information

Name : YPTS_1199 (YPTS_1199)
Accession : YP_001871631.1
Strain : Yersinia pseudotuberculosis PB1/+
Genome accession: NC_010634
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1344371 - 1345192 bp
Length : 822 bp
Strand : -
Note : PFAM: protein of unknown function DUF932; KEGG: ecj:JW0242 conserved hypothetical protein

DNA sequence :
ATGACTCGATTATCTAGCCGTTTCGGTTCAGCCAACCTCGTGCGTCGTGACCGCCCGTTAACTCACGATGAACTTGCACA
CTACGTACCGAGTGTCTTCAGTGAAGAAAAACATGAGTCCCGCAGCTCACGTTACACCTACATCCCAACCATTACTCTGC
TGGAAAATTTGCAGCGGGAAGGCTTTCAGCCGTTCTTTGCATGTCAGACGCGAGTGCGCGATTTGAGTAAGCGCGAACAC
ACCAAACATATGTTACGTCTGCGCCGGGAGGGGCAAATCACCGGTAAACAGGTGCCAGAAATTATTCTGCTTAACAGCCA
CGATGGCTCCAGCTCCTATCAGATGCTGCCGGGCCTGTTCAGGTCGGTATGCCAGAATGGTCTGATCTGCGGCGAGAGTT
TTGGTGAAGTACGCGTACCGCATAAAGGGGATGTGGTGGAGAAAGTTATTGAGGGGGCTTACGAAGTGCTGGGGATCTTT
GACCGGGTGGAAGAGAAGCGCGATACCATGCAGTCCCTGATATTACCGCCACCGGCACAACAGGCGATGGCGAAAGCGGC
ATTAATCTACCGTTTTGGTGAGGAGCACCAGCCCGTAACGGAAGCGCAGCTCCTTTCCCCACGTCGCTGGCAGGATGAGA
GTAACGACCTGTGGACCACTTACCAACGTATTCAGGAGAACCTGATTAAAGGCGGGCTTTCTGGCCGCACAGTGAAAGGT
CAGCGGGCAAGAACCCGTGCCGTTAATGGTATCAACGGGGACGTGAAACTTAACCGCGCTCTCTGGGTGATGGCTGAGAA
TATGCTGCAGCTTGCCTTATGA

Protein sequence :
MTRLSSRFGSANLVRRDRPLTHDELAHYVPSVFSEEKHESRSSRYTYIPTITLLENLQREGFQPFFACQTRVRDLSKREH
TKHMLRLRREGQITGKQVPEIILLNSHDGSSSYQMLPGLFRSVCQNGLICGESFGEVRVPHKGDVVEKVIEGAYEVLGIF
DRVEEKRDTMQSLILPPPAQQAMAKAALIYRFGEEHQPVTEAQLLSPRRWQDESNDLWTTYQRIQENLIKGGLSGRTVKG
QRARTRAVNGINGDVKLNRALWVMAENMLQLAL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
aec71 AAW51754.1 Aec71 Not tested AGI-3 Protein 8e-96 73
yafZ ADD91704.1 YafZ Not tested PAI-I AL862 Protein 8e-96 73
S3199 NP_838482.1 hypothetical protein Not tested SHI-1 Protein 4e-94 73
SF2994 NP_708768.1 hypothetical protein Not tested SHI-1 Protein 4e-94 73
unnamed CAI43843.1 hypothetical protein Not tested LEE Protein 8e-96 73
Z1655 NP_287158.1 hypothetical protein Not tested TAI Protein 1e-95 72
Z1215 NP_286750.1 hypothetical protein Not tested TAI Protein 1e-95 72
c5156 NP_757004.1 hypothetical protein Not tested PAI II CFT073 Protein 9e-92 71
yafZ CAE85199.1 YafZ protein Not tested PAI V 536 Protein 9e-97 71
yafZ YP_854321.1 hypothetical protein Not tested PAI I APEC-O1 Protein 8e-92 71
ORF_47 AAZ04456.1 conserved hypothetical protein Not tested PAI I APEC-O1 Protein 6e-92 71
unnamed CAD66201.1 hypothetical protein Not tested PAI III 536 Protein 2e-92 71
z1215 CAD33785.1 Z1215 protein Not tested PAI I 536 Protein 2e-95 71
ECO103_3587 YP_003223444.1 hypothetical protein Not tested LEE Protein 2e-95 71
unnamed CAD42096.1 hypothetical protein Not tested PAI II 536 Protein 4e-94 70
ORF SG86 AAN62307.1 conserved hypothetical protein Not tested PAGI-3(SG) Protein 7e-75 55
ORF C80 AAN62174.1 conserved hypothetical protein; associated with oriT region on plasmids Not tested PAGI-2(C) Protein 2e-77 55

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
YPTS_1199 YP_001871631.1 hypothetical protein VFG0658 Protein 2e-94 73
YPTS_1199 YP_001871631.1 hypothetical protein VFG1526 Protein 9e-96 71
YPTS_1199 YP_001871631.1 hypothetical protein VFG1676 Protein 1e-92 71
YPTS_1199 YP_001871631.1 hypothetical protein VFG1615 Protein 3e-94 70