Gene Information

Name : YPTS_1197 (YPTS_1197)
Accession : YP_001871629.1
Strain : Yersinia pseudotuberculosis PB1/+
Genome accession: NC_010634
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1343429 - 1343818 bp
Length : 390 bp
Strand : -
Note : PFAM: YagBYeeUYfjZ family protein; KEGG: plu:plu0134 hypothetical protein

DNA sequence :
ATGTCATTAACATCATCCCATGAATGGGGGTTACAAAGTGATGTCATCCCGCGCTTTGGCGCAAGGCTGGTTCAGGAAAG
CAACCGGCTGCACTATCTGGCAGACAGAGCAGGATTGACGGGGAGCTTTAGCCCGGAGCAATTACAAAAACTGGAACAGA
CTTTCTCGCTATTTATCGAGCAGATGGAAGGAATGTTACATTCCGGTGAGCTGAATCCACACCAACAACATCAGGTGACT
ATTCAGCTTGCGGGTTTAACCTGCATAGCAGATACACGTGCCAGCTGCGGCTACGTTTACATTTCTATTTACCCAACTGT
AACGAACGGTGCAATAGTGATCCACACCCAACGCCTGAAATCAGATCCAGGGGGTAATCTGCTCTCCTGA

Protein sequence :
MSLTSSHEWGLQSDVIPRFGARLVQESNRLHYLADRAGLTGSFSPEQLQKLEQTFSLFIEQMEGMLHSGELNPHQQHQVT
IQLAGLTCIADTRASCGYVYISIYPTVTNGAIVIHTQRLKSDPGGNLLS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
yeeU YP_853121.1 antitoxin of the YeeV-YeeU toxin-antitoxin system Virulence PAI IV APEC-O1 Protein 6e-26 63
aec75 AAW51758.1 Aec75 Not tested AGI-3 Protein 5e-26 63
yeeU ADD91700.1 YeeU Not tested PAI-I AL862 Protein 2e-25 62
yeeU CAD42100.1 hypothetical protein Not tested PAI II 536 Protein 1e-25 62
unnamed CAD66206.1 hypothetical protein Not tested PAI III 536 Protein 3e-24 62
Z1220 NP_286755.1 structural protein Not tested TAI Protein 4e-26 59
Z1658 NP_287161.1 structural protein Not tested TAI Protein 4e-26 59
yeeU AAZ04460.1 conserved hypothetical protein Not tested PAI I APEC-O1 Protein 2e-27 59
yeeU YP_854324.1 hypothetical protein Not tested PAI I APEC-O1 Protein 3e-27 59
yeeU NP_838486.1 structural protein Not tested SHI-1 Protein 2e-26 58
yeeU NP_708772.1 structural protein Not tested SHI-1 Protein 2e-26 58
unnamed AAK00481.1 unknown Not tested SHI-1 Protein 1e-26 58
ECO103_3591 YP_003223448.1 hypothetical protein Not tested LEE Protein 5e-26 58
unnamed AAL08477.1 unknown Not tested SRL Protein 2e-24 56

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
YPTS_1197 YP_001871629.1 hypothetical protein VFG1619 Protein 6e-26 62
YPTS_1197 YP_001871629.1 hypothetical protein VFG1681 Protein 1e-24 62
YPTS_1197 YP_001871629.1 hypothetical protein VFG0662 Protein 5e-27 58
YPTS_1197 YP_001871629.1 hypothetical protein VFG1068 Protein 8e-25 56